Gene Information

Name : aldH (BPP1569)
Accession : NP_883853.1
Strain : Bordetella parapertussis 12822
Genome accession: NC_002928
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 1674445 - 1675941 bp
Length : 1497 bp
Strand : -
Note : ortholog of Bordetella pertussis (BX470248) BP1858

DNA sequence :
ATGACCCTGCACGATTCCGCCTACTGGCGCGCGCAAGCCGCCGCCCTCGCCCCCGAAGGCCGCGCCTATATCGACGGCGC
CTATTGCGACGCCGCCGATGGCGCCACCTTCGCCGCGCACAGCCCGATCGACGGCCGCAAGCTGGCCGATATCGCCGCCT
GCGGCGCGGCCGACGTGGACCGCGCGGTGGCCGCCGCGCGCCGCGCCTTCGAGGCCGGCGTCTGGAGCGGCCTGGCCCCG
CGCGAGCGCAAGCACCGCCTGCTGCGCCTGGCCGCGCTGATCACCGAACACCAGGAAGAGCTGGCGCTGCTCGAAACGCT
GGACATGGGCAAGCCGATCCGCGACGCCCTGGCCTTCGACCTGCCCGAGACCGCCCGCTGCTATGCGTGGTACGGCGAAG
CCATCGACAAGCGCTACGACGAGATCGCGCCTACCGGCGCCGACGCGCTGGCCACCATCACGCGCGAGCCGCTGGGCGTG
GTGGCCGCCGTGGTGCCGTGGAATTACCCCTTGATGATGGCGGCCTGGAAAGTGGCCCCGGCGCTGGCCGTGGGCAACAG
CGTCATCCTCAAGCCTGCCGAGCAGGCCTCGCTGTCGGCGCTGCGGCTGGCGGCCCTGGCCGAACAGGCCGGCATCCCGC
CCGGCGTGTTCAGCGTGGTGCCCGGCCTGGGCGCGCAGGCCGGCCAGGCGCTCGGCCTGCACCCGGACGTCGACTGCATC
GCCTTCACCGGCTCGACGGCGACCGGCAAGCGCTTCATGACCTACTCGGGCCAATCCAATCTCAAGCGCGTCTGGCTGGA
GTGCGGCGGCAAGTCGCCCCATATCGTGTTCGCCGACTGCCCCGACCTGGACCGCGCGGCCCAGGTCGCCGCGCTGGCGA
TCTTCTCCAACCAGGGCGAGGTCTGCATCGCCGGTTCGCGCCTGTACGTGCAGCACGGCATCTACGACGCCTTCATGGAA
AAAGTGGCCGCCTTCGCCGCCACCCTGCGCCCCGGCAATCCGCTGGACCCGGACAGCGCGCTGGGCGCCATGGTCGACGA
ACGGCAGACGCAGGCGGTCATGGCCCGCATCGCCGCCGGCGCCCAGGAAGGCGCGCGGCTGCGCCTGGGCGGCCGGCAAG
TGCTGACCGACAGCGGCGGCTACTACATCGAACCGACCATCTTCGATTGTCCCGGCCAGGACAACTCGCTGGTGCGCGAG
GAAATCTTCGGGCCGGTGCTGGCCGCGCAAGGCTTCGCCGACGAGGACGAGGCCGTCGCGCTGGCCAATGATTCCATCTA
TGGGCTGGGGGCCGGGCTGTGGACCGCCGACCTCGGCCGCGCGCACCGCCTGTCGCGCCGCCTGCGCGCCGGGCTGGTAT
GGGTCAACTGCTATGCCGACGGCGACATCACGGTGCCCTTCGGCGGCGTCAAGCAATCCGGCTTCGGGCGCGACAAGTCG
CTGCACGCGATGGACAAGTACAGCGACCTCAAGACCACCTGGATCAGCCTGCGCTGA

Protein sequence :
MTLHDSAYWRAQAAALAPEGRAYIDGAYCDAADGATFAAHSPIDGRKLADIAACGAADVDRAVAAARRAFEAGVWSGLAP
RERKHRLLRLAALITEHQEELALLETLDMGKPIRDALAFDLPETARCYAWYGEAIDKRYDEIAPTGADALATITREPLGV
VAAVVPWNYPLMMAAWKVAPALAVGNSVILKPAEQASLSALRLAALAEQAGIPPGVFSVVPGLGAQAGQALGLHPDVDCI
AFTGSTATGKRFMTYSGQSNLKRVWLECGGKSPHIVFADCPDLDRAAQVAALAIFSNQGEVCIAGSRLYVQHGIYDAFME
KVAAFAATLRPGNPLDPDSALGAMVDERQTQAVMARIAAGAQEGARLRLGGRQVLTDSGGYYIEPTIFDCPGQDNSLVRE
EIFGPVLAAQGFADEDEAVALANDSIYGLGAGLWTADLGRAHRLSRRLRAGLVWVNCYADGDITVPFGGVKQSGFGRDKS
LHAMDKYSDLKTTWISLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-110 56
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-65 44
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 7e-65 44
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 7e-65 44
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 7e-65 44
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-64 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldH NP_883853.1 aldehyde dehydrogenase VFG0082 Protein 3e-65 44