Gene Information

Name : fliP (BPP1500)
Accession : NP_883792.1
Strain : Bordetella parapertussis 12822
Genome accession: NC_002928
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1609035 - 1609835 bp
Length : 801 bp
Strand : -
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence :
TTGCCCGTCATGAGCATCAGCTTCCGTTTTTCCGATACGCGCCCGCGCGCGCCCTGGTGGCCCGCCATGGCCGCCGTCGC
CGTGGCCGCCGCCGCGCTGTGGCCCAGCGGCGCGCTGGCGCAGGCCACCCTGCCGGCCCTGACCGCCACGCCCGGGCCCA
ATGGCTCGGAGACCTACTCGCTCAGCATGCAGACCCTGCTGCTGATGACCTCGCTGTCGTTCCTGCCCGCGGCGCTGCTG
ATGATGACCGGCTTCACGCGCATCATCATCGTGCTGGGGCTGCTGCGCAGCGCCATGGGCACCGCGATGTCGCCGCCCAA
CCACGTGCTGATCGGGCTGGCGCTGTTCCTGACTTTCTACACCATGTCGCCGGTGTTCGACAAAATCTACACCGACGCCT
ACCAGCCGCTGGCCGCGGGCAGCATTCCGTTCGAAACCGCGGTCGAGCGCGCCGGCTCGCCCCTGCACAACTTCATGCTG
CACCAGACCCGCGAGAACGACCTCACCCTGTTCGCCAACCTGGCCAACCTGCCGGCCATGGAAGATCCGTCCCAGGTGCC
GATGCGCATCCTGATCCCGGCTTTCATCACCAGCGAACTGAAGACGGCGTTCCAGATCGGCTTTACCATCTTCATTCCCT
TTCTCATCATCGACCTGGTGGTCGCCAGCGTCCTGATGGCGCTGGGCATGATGATGGTGCCGCCGGTCACCGTGGCGCTG
CCGTTCAAGCTGATGCTGTTCGTGCTGGCCGACGGCTGGCACCTGCTGCTCGGCTCGCTGGCCCAGAGCTTCTACCAATA
G

Protein sequence :
MPVMSISFRFSDTRPRAPWWPAMAAVAVAAAALWPSGALAQATLPALTATPGPNGSETYSLSMQTLLLMTSLSFLPAALL
MMTGFTRIIIVLGLLRSAMGTAMSPPNHVLIGLALFLTFYTMSPVFDKIYTDAYQPLAAGSIPFETAVERAGSPLHNFML
HQTRENDLTLFANLANLPAMEDPSQVPMRILIPAFITSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPVTVAL
PFKLMLFVLADGWHLLLGSLAQSFYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAB06005.2 HrcR Virulence Hrp PAI Protein 5e-27 42
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 6e-20 41
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 4e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP NP_883792.1 flagellar biosynthesis protein FliP VFG2338 Protein 7e-70 74
fliP NP_883792.1 flagellar biosynthesis protein FliP VFG2494 Protein 1e-64 68
fliP NP_883792.1 flagellar biosynthesis protein FliP VFG2016 Protein 8e-54 59
fliP NP_883792.1 flagellar biosynthesis protein FliP VFG1259 Protein 2e-54 59
fliP NP_883792.1 flagellar biosynthesis protein FliP VFG0044 Protein 3e-31 41