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Name : acoD (BPP1323) Accession : NP_883628.1 Strain : Bordetella parapertussis 12822 Genome accession: NC_002928 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.3 Position : 1427431 - 1429023 bp Length : 1593 bp Strand : + Note : ortholog of Bordetella pertussis (BX470248) BP2157 DNA sequence : ATGCGCCCGCCGCGCGACGGCAAGCAATCGTCACGGCGCCACAACGACATCAGGAGACAAACCATGGATCTATCCGACCT GAAAAAATTGGGCCTGGATGTGGCCTACCCGTTCAAGGAACAGTACGAGAACTACATCGGCGGCCAATGGGTGCCTCCGG TAGGCGCGGAGTACTTCGACAATCTGTCGCCCATTACCGGCCAGCCGTTTTGCCGCGTGCCGCGCTCGGGCGCGGCCGAC ATCGAACTGGCGCTGGACGCGGCGCATCGCGCGCGCGCCGCGTGGGCGCGCACCTCGCCCGCCGAGCGGGCCAACATCCT GCTGCGTATCGCCGACCGCATCGAGGGACAGTTGCCGATGCTGGCGGTGGCCGAGTCGATCGACAACGGCAAGCCGCTGC GCGAGACCACCGCGGCCGACCTGCCGCTGGCGATCGACCATTTCCGCTATTTCGCGGGCTGCATCCGGGCGCAGGAGGGC GCCATCTCGGAGATCGACGCCAACACCGTGGCCTACCACTTCCACGAACCCATCGGCGTGGTGGGGCAGATCATTCCCTG GAACTTCCCGCTGCTGATGGCGGCCTGGAAGCTGGCGCCGGCGCTGGCGGCGGGCTGCGTGGTGGTGCTCAAGCCGGCCG AACAGACGCCGGCCTCGATCCTGGTGCTGGCCGAACTGATCGGCGACCTGCTGCCGCCGGGCGTGCTCAACGTGGTCAAC GGCTATGGCAAGGAGGCCGGCCAGGCGCTGGCCACCAGCAAGCGCATCGCCAAGATCGCCTTCACCGGGTCGACGCCGGT GGGCAAGCACATCCTGCACGCGGCGGCCGACAACCTGATCCCCGCCACGGTGGAGCTGGGCGGCAAGAACCCCAACATCT TCTTCGACGACGTGATGGACCACGACGACGAGTTCCTGGACAAGGCGCTCGAGGGGCTGGCCATGTTCGCGCTCAACCAG GGCGAGGTCTGCACCTGCCCGTCGCGCATCCTGATCCAGGAGTCGATCTACGAGCGCTTCATCGAGAAGGCCATCGCGCG GGTGCAGTCCATCAAGACCGGCCATCCGCTCGATGCCGGCACCATGGTGGGCGCGCAGGTCTCGCAGGTGCAGATGGACA AGATCCTGTCCTATATCGATATCGGCCGCCAGGAGGGCGCGCAATGCCTGACCGGCGGCGCGCGCAACGACATGCTGCCG GGCGGGCTGGACCAGGGTTTCTATGTCCAGCCGACCATGCTGCTGGGCAAGAACAGCATGCGCATCTTCCAGGAGGAAAT CTTCGGGCCGGTCGCGGCGGTGGCCACCTTCAAGGACGAGGAGGAGGCCATCGCCATGGCCAACGACACGTTCTACGGCC TGGGCGCGGGCGTCTGGAGCCGCGACGGCGCGCGGGCCTACCGCGTGGGCCGCGGCATCGAGGCCGGCCGGGTGTGGACC AATTGCTATCACCTGTATCCGGCGCATGCCGCCTTCGGCGGCTACAAGCAGTCCGGCATCGGGCGCGAGACGCACAAGGC GGCGCTGTCGAATTACCAGCAGACCAAGTGCCTGCTGGTGAGCTACAGCGCCAAGGCCCTGGGCTTCTTCTAA Protein sequence : MRPPRDGKQSSRRHNDIRRQTMDLSDLKKLGLDVAYPFKEQYENYIGGQWVPPVGAEYFDNLSPITGQPFCRVPRSGAAD IELALDAAHRARAAWARTSPAERANILLRIADRIEGQLPMLAVAESIDNGKPLRETTAADLPLAIDHFRYFAGCIRAQEG AISEIDANTVAYHFHEPIGVVGQIIPWNFPLLMAAWKLAPALAAGCVVVLKPAEQTPASILVLAELIGDLLPPGVLNVVN GYGKEAGQALATSKRIAKIAFTGSTPVGKHILHAAADNLIPATVELGGKNPNIFFDDVMDHDDEFLDKALEGLAMFALNQ GEVCTCPSRILIQESIYERFIEKAIARVQSIKTGHPLDAGTMVGAQVSQVQMDKILSYIDIGRQEGAQCLTGGARNDMLP GGLDQGFYVQPTMLLGKNSMRIFQEEIFGPVAAVATFKDEEEAIAMANDTFYGLGAGVWSRDGARAYRVGRGIEAGRVWT NCYHLYPAHAAFGGYKQSGIGRETHKAALSNYQQTKCLLVSYSAKALGFF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 8e-150 | 67 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 8e-150 | 67 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 8e-150 | 67 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 4e-149 | 67 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 2e-142 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| acoD | NP_883628.1 | aldehyde dehydrogenase | VFG0082 | Protein | 9e-143 | 66 |
