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Name : gabG (BPP1286) Accession : NP_883596.1 Strain : Bordetella parapertussis 12822 Genome accession: NC_002928 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 1386862 - 1388334 bp Length : 1473 bp Strand : + Note : Similar to Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] GabD or B2661 SWALL:GABD_ECOLI (SWALL:P25526) (482 aa) fasta scores: E(): 2.6e-115, 61.61% id in 482 aa, and to Pseudomonas aeruginosa succinate-semialdehyde dehydrogenase GabD or Pa DNA sequence : ATGACCATTTCGCCCCTGCAGTTGTTGAACGACCCGTCCTTGTTGCGTACCGACGCCCTGGTGGACGGCCGCTGGATAGC CGCGAGCCAGCGCTTCGCCGTGCACGACCCGGCCACGGGCCGCAAACTTGCCGACGTAGCCAACCTCGACGCCGCCCACG CGCGCGAGGCCATCGCCGCCGCGCAGGCGGCATGGCCGGCCTGGCGCGCGCGCACGGTCAAGGAGCGCAGCGCCATCCTG CGCAAATGGTTCGACCTGCTGCTGGCGAACCAGGACGACCTGGCTCGGTTGCTGACGGCCGAGCAAGGCAAGCCGTTTGG CGAGGCCCGCGGCGAGATCGCCTATGCGGCCAGCTTCGTCGAATGGTTCGCCGAAGAGGCCAAGCGCATCAACGGCGAGA CCTTGCCGGCCTTCGACAACAATCGCCGCCTGCTGGTGCTGCGCGAACCCATCGGCGTGTGCGCGGCGATCACGCCGTGG AATTTCCCGCTGGCAATGATTACGCGCAAGGTCGCGCCAGCGCTGGCCGCCGGCTGCCCGGTCATCGTCAAGCCCGCCGA ACACACGCCGCTCACCGCGCTGGCCGCCGCCCAGCTCGCCGTGCGCGCCGGCGTGCCGGCCGGCGTGCTGGGCGTGCTGC CCGCCGACGGCGCCAACAGCATCGCCATCGGCAAGGAATTGTGCGCCAACGATGCGGTCCGCCACCTCAGCTTCACCGGG TCCACCGAGGTGGGGCGCATCCTGATGGCGCAAAGCGCCGCCACGGTGAAGAAGCTGTCGCTGGAGCTGGGAGGCAACGC GCCCTTTATCGTGTTCGACGATGCCGATCTCGACAGCGCCGTCGAGGGCGCGATGCAAAGCAAGTACCGCAATGCGGGAC AGACGTGCGTGTGCGCCAACCGCATCTATGTGCAGGATGGCGTCTACGACGCCTTCGTCGAGAAGCTGGCGGACGCGGTC CGGGCCTTGAAGGTCGGGCCGGGCTTCGACGAGGGCGTCACGCAGGGGCCCTTGATCGAACCGGAGGCCGTCGACAAGAT CGAACGGCACATCGAGGACGCCGTGTCCAAGGGCGGCAGGGTGGTGGCGGGAGGCCGGCGGCTGGGCGGGCTGTTCTTCG AGCCGACGGTGCTGGTCGACGCCACCTCGCAGATGCTGTGCGCGCGCGAGGAAACCTTCGGCCCGCTCGCGCCGGTATTT CGCTTCCACGCCGACGAGGATGCCATCGCTGCTGCCAACGCCACGGAGTTCGGTCTGGCCAGCTATCTGTACAGCCGCGA CGTGGGCCGGATATTCCGGGCCGCCGAAGCCCTGGAGTCGGGCATGGTGGGCGTCAATGTCGGCATATTGGCGACCGAGC ACGTGCCGTTCGGGGGCGTCAAGCAATCCGGCCTGGGGCGCGAAGGCGGCCGGCACGGCATCGACGATTACGTCGAGATC AAATACATGTGCGTGGGCGACATTCTCAAATAG Protein sequence : MTISPLQLLNDPSLLRTDALVDGRWIAASQRFAVHDPATGRKLADVANLDAAHAREAIAAAQAAWPAWRARTVKERSAIL RKWFDLLLANQDDLARLLTAEQGKPFGEARGEIAYAASFVEWFAEEAKRINGETLPAFDNNRRLLVLREPIGVCAAITPW NFPLAMITRKVAPALAAGCPVIVKPAEHTPLTALAAAQLAVRAGVPAGVLGVLPADGANSIAIGKELCANDAVRHLSFTG STEVGRILMAQSAATVKKLSLELGGNAPFIVFDDADLDSAVEGAMQSKYRNAGQTCVCANRIYVQDGVYDAFVEKLADAV RALKVGPGFDEGVTQGPLIEPEAVDKIERHIEDAVSKGGRVVAGGRRLGGLFFEPTVLVDATSQMLCAREETFGPLAPVF RFHADEDAIAAANATEFGLASYLYSRDVGRIFRAAEALESGMVGVNVGILATEHVPFGGVKQSGLGREGGRHGIDDYVEI KYMCVGDILK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-122 | 62 |
