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Name : tktA (BPP1164) Accession : NP_883480.1 Strain : Bordetella parapertussis 12822 Genome accession: NC_002928 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 1245167 - 1247203 bp Length : 2037 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGAGCAACCCGACCGCCCCTAAACTTGCCTTGGCGGATGCCATCCGCGTACTTGCGATGGACGCCGTGCAGAAAGCGAA TTCCGGACACCCCGGCGCGCCCATGGGAATGGCCGAAATCGCGCAAGCGCTGTGGCTGGGCAACCTGCGCCACAACCCGG CCGATCCGGCCTGGGCCAACCGCGACCGCTTCGTGCTGTCCAATGGCCACGGCTCGATGCTGATATACGCCCTGCTGCAC CTGACGGGCTACGATCTGCCCCTGGAAGAGCTGAAGAACTTCCGCCAGCTGCATTCGCGCACGCCGGGGCACCCCGAAGT GGGCATCACCCCGGGCGTGGAAACCACCACCGGCCCGCTGGGCCAGGGCCTGGCCAACGCGGTCGGCATGGCGCTGGCCG AGGCCCTGCTGGCGGCCGAATTCAACCGCGCCGGCCACACGGTGGTGGACCACCACACCTATGTCTTTCTGGGCGACGGC TGCCTGATGGAAGGCATCTCGCACGAGGCCTGCTCGCTGGCCGGCACGCTCAAGCTGTCCAAGCTGGTGGCGCTGTACGA CGACAACGGCATTTCCATCGACGGCCATGTCGAGCACTGGTTCGCCGACGACACGGCGACCCGCTTCGAGGGCTACGGCT GGAATGTGATCCGCGGCGTGGACGGCCACGACGTGGCGGCGGTGGACGCGGCCATCAAGCAGGCGCGCGCGCAATCCGAG AAACCCACCCTGATCGTCTGCCGCACCGTGATCGGCAAGGGTTCGCCCAACATGGCCGGCACGCACAATGTGCACGGCGC GCCGCTGGGCAACGACGAGATCGCCGCCACCCGCGCGGCGCTGGGCTGGTCGGCCGGCCCCTTCGAGGTGCCGCAGGATA TCTACGCCGCGTGGGACAGCCGTCCCGCCGGCGCGCTGGCGCAGGCCGCCTGGGAAGACAAGTTCCAGGCCTATGCGGCC CAGTATCCGGCCGAGGCCGCCGAATTCACGCGCCGCATGAAGGGCGAGCTGCCCGAAGGCTTCGCCGCCCGGTTCGAGGC CTTCCTGCAGGCCACCGTGGCCAAGGGCGAGACGGTCGCCACCCGCAAGGCGTCGCAGTTCGCCATCGCCGAGCTGGCCG GCCTGCTGCCGGAGATGCTGGGCGGCTCGGCCGACCTGACCGGCTCGAACTTCACCGACTGGAAGGGCGTGGCGCCGCTG CGCGCCGGCCATCACGGCGTGCATTTCGGCCGCCATATCAACTACGGCGTGCGCGAGTTCGGCATGGCCGCCATCATGAA CGGCATCGCGCTGCATGGCGGCTACCTGCCGTTCGGCGGCACCTTCCTGACGTTCTCGGACTACTCGCGCAACGCCATCC GCATGGCGGCGCTGATGAAGCAGCGCGTGGTGCACGTGTTCACGCACGATTCCATCGGCCTGGGCGAGGACGGTCCGACC CACCAGTCGATCGAACACGCCGCCAGCCTGCGCCTGATTCCCAACCTGTCGGTGTGGCGGCCCTGCGACACCGTCGAGAC GGCCGCCGCCTGGGGCGCTGCCGTGACGCGGCCGGCCAGCATCGGCATGGACGTGCACGACGGCGGCCCGACCGCGCTGC TGCTGTCGCGCCAGAACCTGCCGTTCGTGGCGCGCGACGAGGCCACGCAGAAAGCGATTGTTCGCGGTGGTTACGTCTTG CGCGACGCACACGACGCGCGTGCGGCTATCATCGCCACGGGCTCGGAAGTCGCCATCGCGCTGGCCGCGCAGGAATTGCT GGCCGCCGACGGCATCGCCGTGCGGGTGGTTTCCATGCCCAGCACCGACGTGTTCGACCGCCAGGACGCCGAATGGAAGC GCGAAGTGCTGCCGGCCGGCATGCCGCGCGTGGCCGTCGAGGCGGGCGTGACCGCGTTCTGGCACAAATACGTGGGCCTG GAAGGCGCCGTGGTGGGTATCGACCGCTATGGCGAGTCGGCGCCCGACGGGGCTTTGTTCAAATTCTTCGGACTGACCGC TGAAAAGGTGGCCGAGGCCGTCAAGCAGGTTTTGTAA Protein sequence : MSNPTAPKLALADAIRVLAMDAVQKANSGHPGAPMGMAEIAQALWLGNLRHNPADPAWANRDRFVLSNGHGSMLIYALLH LTGYDLPLEELKNFRQLHSRTPGHPEVGITPGVETTTGPLGQGLANAVGMALAEALLAAEFNRAGHTVVDHHTYVFLGDG CLMEGISHEACSLAGTLKLSKLVALYDDNGISIDGHVEHWFADDTATRFEGYGWNVIRGVDGHDVAAVDAAIKQARAQSE KPTLIVCRTVIGKGSPNMAGTHNVHGAPLGNDEIAATRAALGWSAGPFEVPQDIYAAWDSRPAGALAQAAWEDKFQAYAA QYPAEAAEFTRRMKGELPEGFAARFEAFLQATVAKGETVATRKASQFAIAELAGLLPEMLGGSADLTGSNFTDWKGVAPL RAGHHGVHFGRHINYGVREFGMAAIMNGIALHGGYLPFGGTFLTFSDYSRNAIRMAALMKQRVVHVFTHDSIGLGEDGPT HQSIEHAASLRLIPNLSVWRPCDTVETAAAWGAAVTRPASIGMDVHDGGPTALLLSRQNLPFVARDEATQKAIVRGGYVL RDAHDARAAIIATGSEVAIALAAQELLAADGIAVRVVSMPSTDVFDRQDAEWKREVLPAGMPRVAVEAGVTAFWHKYVGL EGAVVGIDRYGESAPDGALFKFFGLTAEKVAEAVKQVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 61 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 9e-174 | 58 |
