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Name : arsB (BPP0982) Accession : NP_883302.1 Strain : Bordetella parapertussis 12822 Genome accession: NC_002928 Putative virulence/resistance : Resistance Product : arsenical pump membrane protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 1060565 - 1061845 bp Length : 1281 bp Strand : + Note : Similar to Escherichia coli, and Escherichia coli O157:H7 arsenical pump membrane protein ArsB or ArsF or B3502 or Z4904 or Ecs4374 SWALL:ARSB_ECOLI (SWALL:P37310) (429 aa) fasta scores: E(): 3e-115, 72.06% id in 426 aa, and to Serratia marcescens ArsB tr DNA sequence : ATGATCACCGCCGCCGTCATTTTCCTGTTCACCCTGACGCTGGTGATCTGGCAGCCGCGCGGGCTGGGCATAGGCTGGAG CGCCTGCCTGGGCGCGGCCATTTCGCTGGCCACCGGCGTGGTGCACTGGAGCGACATCCCCGTTGTGTGGGGCATCGTCT GGAATGCCACCGCCGCCTTCATCGCCATCATCATCGTCAGCCTGCTGCTGGACGAAGCGGGCTTTTTCGAATGGGCCGCG CTGCACGTGGCGCGCTGGGGCCGCGGGCGCGGCCGCATGCTGTTCGCCTGGATCGTGCTGCTGGGCGCGGCCGTCTCGGC GCTGTTCGCCAACGACGGCGCCGCGCTCATCCTCACGCCCATCGTCATGGCCATGCTGGCCGCGCTGGGCTTTGGCGCCG GCGCCACGCTGGCCTTCGTCATGGCCGCCGGCTTCGTCGCCGACACCGCCAGCCTGCCGCTGATCGTCTCCAACCTGGTC AACATCGTCTCGGCAGACTACTTCGGCATCGGTTTCAACCGCTATGCCGCGGTGATGATTCCCGTGACGCTGGTGTCGGT GGCCGCCACGCTGGCCGTGCTGCTGCTGCGCTTTGGCGCCAGCGTGCCGGCGCGCTACGACGCCTCGCAGCTGAAAGCGC CGCGCGCGGCCATCCGCGACCCGCGCACCTTCCGCGCCGGCTGGATGGTGCTGGCCCTGCTGCTGGTGGGGTTCTTCGGC CTGGAGCCGCTGGGCGTGCCGGTCAGCGCCACCGCGGCGGCGGCCGCCGCCGTGCTGCTGGCCGTGGCCGGGCGCGGCCA TTTCATCAGCACGCGCAAGGTCATGCGCGAAGCGCCCTGGCACATCGTGGTGTTCTCGCTCGGCATGTACCTGGTGGTGT TCGGCCTGCGCAATGCCGGCCTTACCCAGTCGCTGGCCGACCTGTTCGGCTGGTTCGCCTCGCACGGCCTGTGGGCCGCC ACCTACGGCGTAGGCCTGGTCACCGCCTTGCTGTCTTCGGTGATGAACAACCTGCCCACCGTGCTGGTGGGCGCCCTGTC GATCGACGCCAGCAGCGCCAGCGGCGCGGCGCGCGAGGCCATGGTGTACGCCAACGTCATCGGCAGCGACCTCGGCCCCA AGATCACGCCCATCGGCAGCCTGGCAACCTTGCTGTGGCTGCACGTGCTGGCGCGCAAGGGCGTGCGCATCTCGTGGGGC TATTACTTCAAGGTCGGCATCGTGCTGACCCTGCCGGTGCTGCTGCTCACGCTGGGCGCGCTGGCGCTGCGGCTGTCGTA A Protein sequence : MITAAVIFLFTLTLVIWQPRGLGIGWSACLGAAISLATGVVHWSDIPVVWGIVWNATAAFIAIIIVSLLLDEAGFFEWAA LHVARWGRGRGRMLFAWIVLLGAAVSALFANDGAALILTPIVMAMLAALGFGAGATLAFVMAAGFVADTASLPLIVSNLV NIVSADYFGIGFNRYAAVMIPVTLVSVAATLAVLLLRFGASVPARYDASQLKAPRAAIRDPRTFRAGWMVLALLLVGFFG LEPLGVPVSATAAAAAAVLLAVAGRGHFISTRKVMREAPWHIVVFSLGMYLVVFGLRNAGLTQSLADLFGWFASHGLWAA TYGVGLVTALLSSVMNNLPTVLVGALSIDASSASGAAREAMVYANVIGSDLGPKITPIGSLATLLWLHVLARKGVRISWG YYFKVGIVLTLPVLLLTLGALALRLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 6e-116 | 71 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 1e-89 | 57 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 2e-90 | 56 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 1e-88 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| arsB | NP_883302.1 | arsenical pump membrane protein | BAC0577 | Protein | 2e-114 | 72 |
| arsB | NP_883302.1 | arsenical pump membrane protein | BAC0578 | Protein | 3e-114 | 72 |
| arsB | NP_883302.1 | arsenical pump membrane protein | BAC0031 | Protein | 1e-115 | 71 |
| arsB | NP_883302.1 | arsenical pump membrane protein | BAC0576 | Protein | 1e-115 | 71 |
| arsB | NP_883302.1 | arsenical pump membrane protein | BAC0574 | Protein | 5e-90 | 57 |
| arsB | NP_883302.1 | arsenical pump membrane protein | BAC0575 | Protein | 1e-90 | 56 |
