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Name : BB0781 (BB0781) Accession : NP_887330.1 Strain : Bordetella bronchiseptica RB50 Genome accession: NC_002927 Putative virulence/resistance : Virulence Product : type II secretion system protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 818578 - 820203 bp Length : 1626 bp Strand : - Note : Similar to Pseudomonas putida XcpR protein SWALL:Q52292 (EMBL:X81085) (482 aa) fasta scores: E(): 8.6e-51, 43.21% id in 405 aa, and to Vibrio cholerae general secretion pathway protein E EpsE or vc2732 SWALL:GSPE_VIBCH (SWALL:P37093) (503 aa) fasta scores DNA sequence : ATGGTCGAACGCGGGCTGCTCACGCCGGTGCAACTGCTATACGCCGAACAGAAACACACGGTCGAACCGCTGCCGCTGAG CCGCCTGCTGATCCAGAACGGCCTGGCCGAGGAACGCGTGGTGGTGGCCACGCTGGCCGAACTGCAAGGCATCGAGTTCG TCGCCGGCGACGTGCTGCCCGAGGCCGACCCGCAGGTGCTGGCCATGTTCAACCGCGAACTGTGCCTGACCCACAATTTC CTGCCCCTGCGCCGCCAGGACGGCGAGCTGCAAGTGCTGCTGGGCGAAGCGGTGCCGGCGCGCGTGGCGGCGCTGGTCCT GCAGCGCACCAGCCTGCGCTGCCGCTTCATGCAGGCCGAGTTCTCGCTGGTCACCCGCCTGATCCGCCACAGCTATTACT TCGCGCAGAACCCGCTGGAAAGCCTGCTGGCGCGCGAAGTGCGCCGCCTCTCGGACGATCCCGACCACGTCTTCAGCCCC GACAAGGTGCTGGACTACCTGCTGCACCTGGCGGTGCGCGAGCGCACCACCGACATCCACATCACCGCCGAGGCCAGCAG CCTGCACGTGCTGTTCCGCGTCGATGGCGTGCTGCGCCCGATGATGGCGCTGCCGCCCAGCCTGCAGCGCCTGCTGGGCT ACATCAAGCTGACGGCGGAGATGGACATCTCGGACCAGCGCCGTCCGCAGGACGGCAGCTTCCGCGCCCACATCCTCGAC GCCGCGCTGACCATCCGCGTGTCGACCATCGTCACCGAGCATGGCGAGCGCATGGTCATGCGCCTGCTGCCCGAGCACAA CAACCTGTCCGGCCTGGCCGACCTGGGCTTTTTCGCCGAAGACGTGGAGCGGCTCGAACGGCTGTTCGCCAAGCCCAACG GCCTGGTGCTGATCACCGGGCCCACCGGCTCGGGCAAGAGCAGCTCGCTGCACGCCGCGCTGCGCATGCAGTCGCTGATC GAGCGCAACGTGCTCACGGTGGAAGACCCGCTCGAGTACCGCGTGCCCGGCGCCGGGCAGACCGAGGTCAACCGGCGCGC CGGCTACGACTTCACCACGGCGCTGCGCCACTTCCTGCGGCACGATCCGGACGTGATCCTGCTGGGCGAAATGCGCGACG CCGAGACCGCGCAGGCCGCGGTCGAGGCCGCGGCCACCGGCCACCTGGTGCTGTCCACGCTGCACGTCACCAGCGTGTTC GGCGTGGTGCCGCGCCTGCAGCCGCTGGGGCTGGACTCGCAGTCGATCGCCGAGAACCTGCTGGTGGTGGTCAACCAGCG GCTGGTGCGGCAGAACTGCCCGTTCTGCGCCGCCGAAGTGGCCTTCACGGCGGCCGAGCGCGCCTGGCTCGGCGTGGACG AGCACGCCACCGGCCGGCGCGGCGCGGGCTGCGGCCGCTGCCGCCAGACCGGCTACCTGGGCCGCCTGCCGGCCTACGAA ATCCTGGAAATCGACGAAACGCTGGCCAACGCCATCGCCGACACCGCCGGCCGCGAAGCCATCCGCTCGCTGGCGCATGC GCGCGGCTTTCGCGGCATGGCCGAGCTGGCGCGCGAGCGCGTGCGGCGCGGCCAGACCACCGCCGAGGAAGTGCTGCGCG TGGTCGGGGACGGGCCGGCGTCATGA Protein sequence : MVERGLLTPVQLLYAEQKHTVEPLPLSRLLIQNGLAEERVVVATLAELQGIEFVAGDVLPEADPQVLAMFNRELCLTHNF LPLRRQDGELQVLLGEAVPARVAALVLQRTSLRCRFMQAEFSLVTRLIRHSYYFAQNPLESLLAREVRRLSDDPDHVFSP DKVLDYLLHLAVRERTTDIHITAEASSLHVLFRVDGVLRPMMALPPSLQRLLGYIKLTAEMDISDQRRPQDGSFRAHILD AALTIRVSTIVTEHGERMVMRLLPEHNNLSGLADLGFFAEDVERLERLFAKPNGLVLITGPTGSGKSSSLHAALRMQSLI ERNVLTVEDPLEYRVPGAGQTEVNRRAGYDFTTALRHFLRHDPDVILLGEMRDAETAQAAVEAAATGHLVLSTLHVTSVF GVVPRLQPLGLDSQSIAENLLVVVNQRLVRQNCPFCAAEVAFTAAERAWLGVDEHATGRRGAGCGRCRQTGYLGRLPAYE ILEIDETLANAIADTAGREAIRSLAHARGFRGMAELARERVRRGQTTAEEVLRVVGDGPAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-42 | 41 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-42 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BB0781 | NP_887330.1 | type II secretion system protein | VFG2048 | Protein | 3e-43 | 41 |
