|
Name : katA (BB4994) Accession : NP_891528.1 Strain : Bordetella bronchiseptica RB50 Genome accession: NC_002927 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : 1.11.1.6 Position : 5314847 - 5316286 bp Length : 1440 bp Strand : + Note : ortholog of Bordetella pertussis (BX470248) BP3852 DNA sequence : ATGACCAACAAGACCCTCACTACCGCCGCCGGTGCGCCGGTTGCCGACAACAACAACACCATGACGGCGGGGCCGCGCGG CCCCGCCCTGCTGCAGGACGTCTGGTTCCTGGAGAAACTGGCCCACTTCGACCGTGAACGCATTCCCGAGCGCGTGGTGC ACGCCAAAGGCTCGGGCGCCTATGGCACCTTCACGGTCACGCATGACATTTCCCGCTACACGCGCGCCAGGATCTTCGCC GAAGTCGGCAAGCAGACGCCGTTGTTCCTGCGCTTTTCGACCGTGGCCGGCGAGCGCGGCGCGGCCGACGCCGAACGTGA CGTGCGTGGCTTCGCCATCAAGTTCTATACCGACGAAGGCAACTGGGACCTGGTCGGCAACAACACGCCCGTGTTCTTCA TTCGCGATCCGCTCAAGTTCCCCGACTTCATCCATACCCAGAAGCGCGACCCCAAGACCAACCTGCGCAACGCCACCGCC GCCTGGGACTTCTGGTCGCTCAACCCGGAATCGCTGCACCAGGTCACCATCCTGATGAGCGATCGCGGACTGCCGCAGAA CTATCGCCAGCAGCACGGCTTCGGCTCGCATACCTACAGCTTCGTCAACGACGCCGGCGAGCGTTTCTACGTCAAGTTCC ACTTCAAGTCGCAGCAAGGCATCGCCTGTTATACGGACGGCGAAGCCGCCGAGCTGGTCGGCCGCGATCGCGAAAGCGCG CAGCGCGACCTGTTCCAGAACATCGAGCAGGGCCAGTTCCCGCGCTGGACGCTCAAGGTGCAGGTAATGCCCGAAGCCGA GGCCGCCACCTATCACATCAACCCGTTCGACCTGACCAAGGTGTGGCCGCATGCCGACTACCCCTTGATCGAAGTGGGCG TGCTGGAACTGAACAAGAACCCCGAGAACTATTTCGCCGAAGTCGAACAGGCCGCGTTCACGCCGGCCAATGTGGTGCCG GGCATCGGCTTTTCGCCCGACAAGATGCTGCAGGGTCGCCTGTTCTCGTACGGCGACACCCATCGCTACCGCCTGGGCAT CAACCACCATCAGATTCCCGTCAATGCGCCGCGCTGCCCGTTCCACAGCTTCCATCGCGACGGGATGGGCCGGGTCGACG GCAATGGCGGCGCCACGCTGAACTACGAACCCAACAGTTTCGGCGAATGGCGCGAAGCCAAGCACGCAGCCGAACCGCCG CTGGCGCTGGACGGACAGGCCGCCGACCGCTGGAACCATCGGGTCGACGAGGACTACTACTCGCAGCCGGGCGCGCTGTT CCGTCTCATGAACGACGACCAGAAACAGCAGCTGTTCGGCAACATCGGCCGCCACATGGCCGGCGTGCCCGAGGAAATCC AGCGCCGCCAGCTCGAGCACTTCCGCCGTGCCGACCCGGCCTATGCCGCGGGCGTGGCCAAGGCCCTGGGCCTGAAGTAA Protein sequence : MTNKTLTTAAGAPVADNNNTMTAGPRGPALLQDVWFLEKLAHFDRERIPERVVHAKGSGAYGTFTVTHDISRYTRARIFA EVGKQTPLFLRFSTVAGERGAADAERDVRGFAIKFYTDEGNWDLVGNNTPVFFIRDPLKFPDFIHTQKRDPKTNLRNATA AWDFWSLNPESLHQVTILMSDRGLPQNYRQQHGFGSHTYSFVNDAGERFYVKFHFKSQQGIACYTDGEAAELVGRDRESA QRDLFQNIEQGQFPRWTLKVQVMPEAEAATYHINPFDLTKVWPHADYPLIEVGVLELNKNPENYFAEVEQAAFTPANVVP GIGFSPDKMLQGRLFSYGDTHRYRLGINHHQIPVNAPRCPFHSFHRDGMGRVDGNGGATLNYEPNSFGEWREAKHAAEPP LALDGQAADRWNHRVDEDYYSQPGALFRLMNDDQKQQLFGNIGRHMAGVPEEIQRRQLEHFRRADPAYAAGVAKALGLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 2e-169 | 72 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 4e-102 | 48 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 5e-98 | 44 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 5e-98 | 44 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 5e-98 | 44 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 5e-98 | 44 |
