|
Name : BB4962 (BB4962) Accession : NP_891496.1 Strain : Bordetella bronchiseptica RB50 Genome accession: NC_002927 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1116 EC number : - Position : 5280557 - 5281330 bp Length : 774 bp Strand : + Note : ortholog of Bordetella pertussis (BX470248) BP0462 DNA sequence : GTGATGATCGAGCTCGAGCACGTCGGCAAGGTCTACCAGGCCCGCAATGCCACCGTGCACGCCGTAGGCGAGGTCAGCCT GCGCATCGACGACGGCGAGTTCGTCGCCATCGTCGGCCCGTCCGGCTGCGGCAAGAGCACGCTGCTGAACATGATCGCGG GCTTCCTGCCGCCCACCACCGGCACGGTCCGCGTCGCCGGCGCGCCGGTGGCCGGCCAGGTTCCGCCGGCGCTGGGCTAC ATCTTCCAGAAAGACACCCTGCTGCCCTGGTTCAATGTGCGCAAGAACGTGGCGCTGGGCCTGCGGTTCCAGGGCGTGGA CAGCGCGCGCATCGCCCGGCGCGTGGACGAACTGCTGGAACTGGGACACCTGAGCGGTTTTGCCAACGCCTATCCGCACC AGTTGTCCGGCGGCATGCGCCGCCGCGTGGCGCTGCTGATGAGCCTGGCCGTCGAGCCGCGCATCCTGTTGCTGGACGAA CCCTTCGGCGCGCTCGACACCCACACCAAGACCCATCTGCATCGCGAGCTGGGCGAGATCTGGCGCAAGCTGGGCCAGAC CATCGTCATGGTCACGCACGACCTGGACGAGGCGATCACGCTGGCCGACCGGGTCGTCGTCCTGTCGGGCCCGCCCAGCC GCGTGCTGCTCGACGAGCGCATCGCCATCGCCCACCCGCGCGACGTCTTCACGCTGCGCGACACGCCGCAGTTCACCGCG CATATGCGCAGCCTGTGGGCCGTCCTGGGCCAGCAGTTCCGCAACGCCGCCTGA Protein sequence : MMIELEHVGKVYQARNATVHAVGEVSLRIDDGEFVAIVGPSGCGKSTLLNMIAGFLPPTTGTVRVAGAPVAGQVPPALGY IFQKDTLLPWFNVRKNVALGLRFQGVDSARIARRVDELLELGHLSGFANAYPHQLSGGMRRRVALLMSLAVEPRILLLDE PFGALDTHTKTHLHRELGEIWRKLGQTIVMVTHDLDEAITLADRVVVLSGPPSRVLLDERIAIAHPRDVFTLRDTPQFTA HMRSLWAVLGQQFRNAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABA47263.1 | ABC transporter | Not tested | S-PAI | Protein | 1e-35 | 41 |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 7e-27 | 41 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 3e-27 | 41 |
