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Name : rpsN (BB0044) Accession : NP_886597.1 Strain : Bordetella bronchiseptica RB50 Genome accession: NC_002927 Putative virulence/resistance : Unknown Product : 30S ribosomal protein S14 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0199 EC number : - Position : 43699 - 44004 bp Length : 306 bp Strand : + Note : located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are prese DNA sequence : GTGGCTAAACTCTCCCTCATCAATCGTGATATCAAGCGCGCCAAGCTGGCTGACAAGTATGCCGCCAAGCGCGCCGAATT GAAGGCGATCATCGACGACCAGTCGAAGACCGACGAAGAACGTTACCAAGCTCGGCTCAAGCTGCAACAGCTGCCGCGCA ATGCCAACCCCACTCGCCAACGCAATCGTTGCGTGGTTACCGGTCGTCCGCGCGGCGTGTTCCGCAAGTTCGGCCTGACC CGCCACAAATTGCGTGAAATGGCGATGAAGGGCGAAGTTCCCGGCATGACCAAGGCCAGCTGGTAG Protein sequence : MAKLSLINRDIKRAKLADKYAAKRAELKAIIDDQSKTDEERYQARLKLQQLPRNANPTRQRNRCVVTGRPRGVFRKFGLT RHKLREMAMKGEVPGMTKASW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rpsN | NP_814350.1 | 30S ribosomal protein S14 | Not tested | Not named | Protein | 4e-11 | 48 |
| ef0103 | AAM75306.1 | EF0103 | Not tested | Not named | Protein | 3e-11 | 48 |
