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Name : BB4729 (BB4729) Accession : NP_891262.1 Strain : Bordetella bronchiseptica RB50 Genome accession: NC_002927 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 5030653 - 5032344 bp Length : 1692 bp Strand : + Note : Similar to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase atu3053 or agr_l_3504 SWALL:Q8UBG3 (EMBL:AE009236) (575 aa) fasta scores: E(): 1.8e-114, 61.32% id in 543 aa, and to Rhizobium meliloti oligopeptide ABC transporter ATP-binding DNA sequence : GTGACAGCTACCCATCCAGCCTCGTCCGCCGCGCCGCTGCTTTCCATCCAGGACCTCAGCATCGCGCTGCCCGCCGGCGG CGACCGCCCGTATGCGGTCCGCAATATCTCGTTCGACATCAACGCGGGAGAAATCCTCTGCATCGTCGGCGAATCCGGCT CGGGCAAATCCATGAGCGCCAACGCCATCATGGGCCTGCTGCCGCACTACCTGCGCCCCGAGGGCGGACGCATCCTGTTC GACAACCGCGACCTGCTCTCGCTGGACGAATCCACGCTGCGCGGCATGCGCGGGCGCGAAATGGCCATGATCTTCCAGGA ACCGCTGTCGGCGCTGAACCCGCTGCTGACCGTCGGCGAGCAGATCGAGGAAGTCATGCGCGTGCACAACGCCTATCCAG AGCAGGAGCGCGCGCAGCGCGTGCTCGACGTGCTGGAGTTCGTCGGCCTGCCCGAGCCCCGGCTGATCCGGCACGCCTGG CCTTTCCGCCTGTCCGGCGGCCAGCGCCAGCGCGTCATGATCGCCATGGCGCTGGTGCTCGAACCCCGGCTGCTGATCGC CGACGAGCCCACCACCGCGCTGGACGTCACGACCCAGGCGCAGATCCTCGAACTGATCGCCCGCATCCAGCGCCAGAAAG GCATGGGCGTGATGTTCGTCACCCACGACTTCGGCGTGGTGGCCGAAATCGCCGACCGCGTGGCGGTGATGGAAAAAGGC ATCCTGGTCGAGGAAGGCACGGCCGACCAGGTGCTCAACCGGCCGCGCCATCCGTACACGCAGCGGCTGATCGCCGCGGT GCCCACCCAGCGCACCGGCGGCGACGCAAGCCCGGCCGCGGCGTTCAGCCCGGTGCTGCATGTGCGCAACCTGAAGAAGA CCTACGCCGCCGCCGGCGGGCTGTTCCACAAGAAGCGCGTCGTGCACGCCGTCAATGACGTCAGCTTCACCGTGGGACGC GGCCAGACGGTCGGCATCGTGGGCGAATCGGGTTCGGGCAAATCCACCATCGGCAAGTGCCTGCTCAAGCTGATCGACAT CGACGGCGGCCAGATGCTGTTCGAAGGCAAGGACATCGCGCCCCTGACCGAGGCGCAGTTCCGGCCGCAGCGGCGCAAGA TCCAGATGATCTTCCAGGATCCGTTCGCCTCGCTCAACCCGCGCCACACGGTGGGCCGCATCCTGTGCGACGGCCCCATG GCGGGCGGCACGCCGCGCCAGCAGGCCGAAAAGCGCGCGCGCGAATTGCTCAGGCTGGTCGAGCTGGATCCGTCCGCCTT CGACCGCTATCCGGGCGAATTCTCCGGCGGCCAGCGCCAGCGCATCGGCATCGCGCGCGCGCTCGCCATGGACCCGCAGC TGATCGTGGCCGACGAATCGGTCTCGGCCCTGGACGTATCGGTGCAGGCCCAGGTGCTCAAGCTGCTGCGCGAGGTCCAG CAGCGCCTGCAGCTGGCGCTCATCTTCATCACGCACGACCTGCGCGTGGCCTCGCAGATCTGCGACCACCTGCTGGTCAT GCATCGCGGCAAAGTGGTCGAGCAGGGGCCGCCCACGCAGATCTTCGACGACCCGCAGGACCCCTACACGCGCCAGCTGA TCGCCGCCATGCCCGGGCGCGACTGGGATCCCGCGGCCGCCGCGCTCGCGCAGGCCGCCGACGAACCCGCCCTGTACCCA CAGCCATGCTGA Protein sequence : MTATHPASSAAPLLSIQDLSIALPAGGDRPYAVRNISFDINAGEILCIVGESGSGKSMSANAIMGLLPHYLRPEGGRILF DNRDLLSLDESTLRGMRGREMAMIFQEPLSALNPLLTVGEQIEEVMRVHNAYPEQERAQRVLDVLEFVGLPEPRLIRHAW PFRLSGGQRQRVMIAMALVLEPRLLIADEPTTALDVTTQAQILELIARIQRQKGMGVMFVTHDFGVVAEIADRVAVMEKG ILVEEGTADQVLNRPRHPYTQRLIAAVPTQRTGGDASPAAAFSPVLHVRNLKKTYAAAGGLFHKKRVVHAVNDVSFTVGR GQTVGIVGESGSGKSTIGKCLLKLIDIDGGQMLFEGKDIAPLTEAQFRPQRRKIQMIFQDPFASLNPRHTVGRILCDGPM AGGTPRQQAEKRARELLRLVELDPSAFDRYPGEFSGGQRQRIGIARALAMDPQLIVADESVSALDVSVQAQVLKLLREVQ QRLQLALIFITHDLRVASQICDHLLVMHRGKVVEQGPPTQIFDDPQDPYTRQLIAAMPGRDWDPAAAALAQAADEPALYP QPC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 7e-80 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 7e-80 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 7e-80 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 7e-80 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-100 | 42 |
