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Name : lpdA (BB4695) Accession : NP_891227.1 Strain : Bordetella bronchiseptica RB50 Genome accession: NC_002927 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : 1.8.1.4 Position : 4993017 - 4994426 bp Length : 1410 bp Strand : - Note : ortholog of Bordetella pertussis (BX470248) BP0618; Similar to Escherichia coli, and Escherichia coli O157:H7 dihydrolipoamide dehydrogenase lpda or lpd or b0116 or z0126 or ecs0120 SWALL:DLDH_ECOLI (SWALL:P00391) (473 aa) fasta scores: E(): 1.4e-93, 56% DNA sequence : ATGGCTTCGACGATGGAAACGGACTTGCTCGTGCTCGGCGGCGGACCCGGCGGCTATACCGCTGCGTTTCGCGCCGCCGA CCTGGGGCTTTCCGTGGTGCTGGTGGAGCAGCGTCCGACCCTGGGCGGCGTTTGCCTGAACGTGGGCTGCATCCCCTCCA AGGCGCTGCTGCATTGCGCCAAGGCGCTGGACGAGGCGCGCGCCATGAGCGAGCTGGGCATCGAGTTCAGCGAGCCGCGC ATACGCCTGGACAAGCTGCGCGCACACAAGGAGGCGCTGGTGGCCAAGCTGTGCGGCGGCCTGGGCGGGCTGGCGCGCCA GCGCAAGGTGCAGGTGGTGACCGGCACGGGACGCTTCGACGGCCCGCACAGCCTGGCGGTATCCGATGGTTCCCGCGTGG CGTTCAAGCAGGCCGTCATCGCGGTCGGTTCGCGCCCGGTGCGCCTGCCGTTCCTGCCCGACGACCCGCGCATCATGGAT TCGACCGGCGCGCTGGAGCTCAAGGAGATTCCCCGGCGCCTGCTGGTGATCGGCGGCGGCGTCATCGGCATGGAGCTGGC CACGGTCTATGCGGCCCTGGGGGCGCGCGTGACGGTGGTCGAGCTGACCGACGGCCTGCTGCCGGGCTGCGACCGCGACC TGGTCAAGCCGCTGGCGCAGCGCGTGGCCGGCCGCTACGAGGCCGTCCTGCTGGGCACGCGCGTAAGCGCGGCCCAGGCG CGCGATGACGGCATCCATGTCGGCTTCGAAGGCCCGCAGGCGCCCGGCCCGCAGGTGTACGATCAGGTGCTGGTGGCCGC GGGCCGCCGGCCCAATGGCGCGGCCATCGACGCCGAGCGCGCCGGCGTGCGCGTCGACGAGGGCGGCTTCATCCGCGTCG ACGCGCAGCAGCGCACCAATGTCGGGCACATCTACGCCATCGGCGACGTGGTGGGCGAACCCATGCTGGCGCACAAGGCC GCCCATGAAGGCAAGGTGGCCGCCGAGACCGCGGCGGGCATGCGCGTGGCCAACGACGCGCGGGTGATTCCGGCGGTGGC CTACACCGATCCCGAGGTGGCCTGGGTGGGCCTGACCGAAACCGCGGCGCAGCGCGACGGCATTGCCTACGAGAAAGCCG CTTTTCCGTGGGCGGCCAGCGGCCGCGCGCTCAGCCTGGGACGCGGCGAGGGCCTGACCAAGATCCTCGTGGACCCGGCC ACGCACGCCTTGCTGGGCGTGGGCATGGTGGGGCCGCAGGCCGGCGACCTGATCGCCGAGGCCGCGCTGGCCATCGAGAT GGGCGCCGAACCGGGCGACATCGCGCTGACCATACACCCGCATCCGACCTTGTCCGAAACCCTGGCCTTCGCGGCCGAGG CGTACGAGGGAACGCTTACCGAGTTGTACCTGACCAGGAAAAAAAGTTAA Protein sequence : MASTMETDLLVLGGGPGGYTAAFRAADLGLSVVLVEQRPTLGGVCLNVGCIPSKALLHCAKALDEARAMSELGIEFSEPR IRLDKLRAHKEALVAKLCGGLGGLARQRKVQVVTGTGRFDGPHSLAVSDGSRVAFKQAVIAVGSRPVRLPFLPDDPRIMD STGALELKEIPRRLLVIGGGVIGMELATVYAALGARVTVVELTDGLLPGCDRDLVKPLAQRVAGRYEAVLLGTRVSAAQA RDDGIHVGFEGPQAPGPQVYDQVLVAAGRRPNGAAIDAERAGVRVDEGGFIRVDAQQRTNVGHIYAIGDVVGEPMLAHKA AHEGKVAAETAAGMRVANDARVIPAVAYTDPEVAWVGLTETAAQRDGIAYEKAAFPWAASGRALSLGRGEGLTKILVDPA THALLGVGMVGPQAGDLIAEAALAIEMGAEPGDIALTIHPHPTLSETLAFAAEAYEGTLTELYLTRKKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 5e-75 | 41 |
