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Name : BB4112 (BB4112) Accession : NP_890646.1 Strain : Bordetella bronchiseptica RB50 Genome accession: NC_002927 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 4373701 - 4375353 bp Length : 1653 bp Strand : - Note : ortholog of Bordetella pertussis (BX470248) BP0723 DNA sequence : ATGATATTTCGCAAGCGCGATCTCCAACATCGCCCGGTGGTGCTGCGCATCGCGGGCCTGTCCCTGGTGGACGGGCAGCC GGGCGCCGGCAGCGCCATCCTGCGGGATATCGACGTCGATATCCGGCAGGGCGAGACGGTCTGCCTGGTGGGCGAAAGCG GCTCGGGCAAGTCCATGACCTCGCTGGCGGTCATGGGCCTGCTGCCCAAGGGGCATCTGCGGGTGACAGGCGGACGCATC GAACTCGATGGCCAGAACCTGCTCGACCTCGGGCCGGCCGCCTTGCGGGACTTGCGCGCCAAGCGCATTTCCATGATTTT CCAGGAGCCCATGACGGCCCTGAACCCGGTCATGAAGGTGGGGCCGCAGATCGAAGAGGTGCTGGACAGCCACACGGCGC TGCCCAGGCGCGAGAAAAAGCAGCGCGTGCTCGACATCATGGAGCAGGTCCACCTGCCCGACGTGGCGCGTATCTACGAG TCCTATCCGCACCAGCTCTCCGGCGGGCAGCGCCAGCGCATCATGATCGCCATGGCGTTGGTGCTGGAGCCGCGGCTGCT GATCGCCGACGAGCCGACCACCGCGCTGGACGTCACCACGCAGAACCAGGTGCTCAAGCTGATCAGCGAGCTGCAGCACA AGCACGATACGGCGGTGCTGTTCATCACCCATGACATGGGGGTGGTGGCCGAGATCGCCGACCGGGTCTATGTCATGCGC CTGGGCGAAATCGTCGAGAGCGCGCCGGTCGAGCAATTGTTGCGCGAACCGCGGCAGGACTACACCCGCAAGTTGCTCAA GTCGGTGCCCAGCCTGATTCCGCGGCCCGGCCGGGCCGCGCCGCAGGCGTGCGCCACGCTGCAGGTGCAGGGGCTTGCGA AACGCTATGCGATGGGCGGGTTCCCGGGCCGCCGGCGGGAAGTCCAGGCCGCGCACGATGTCGCGTTCAGCATCCAGCCC GGCCGTACGCTGGGCATCGTGGGCGAGAGCGGCTCGGGCAAGTCCACGGTGGCGCGCTGCGTGATGCGGCTGATCGAGCC GAGCGAAGGCGCCATCCGTGTCGGCGATGCCGATATCGCGCGGCTGGGCCCCAGGCAGCTCAAGCCGTTTCGCAAGCATC TGCAGATCGTCTTCCAGGATCCGTACCGTTCGCTCAACCCCCGCCGCACCATCGGCGCCAGCCTGATCGAAGGGCCGGTG AACTTCGGGCAGGACAGGCAGGCCGCGCTGGCGCAGGCGGCCGAATTGCTGGAGCTGGTGGGCCTGCCGGCCGACGCCCT GGCGCGCTATCCCCATCAGTTCTCGGGCGGGCAGCGGCAGCGCATCGCCATCGCGCGCGCCATCGCCATGCGGCCCGACG TCCTGGTGGCCGACGAGGCGGTGTCCGCGCTCGATGTCTCGGTACAGGCGCAGGTGCTCGAATTGCTCGACACGCTGCAG CGCAAGCTGGACATCGCGATTCTGTTCATCACGCACGATCTGCGGGTGGCCGCGCAGATCTGCGACGAGGTCATGGTGAT GCGGCATGGCCGCGTGGTGGAGCACGACACGGCCGAGAATGTCCTGGCGCGGCCCGCGCACGCCTACACGCGCGCGTTGA TCGAGGCCGCGCCGGGACGCGATTGGGACTTTGCCAACTTTCGCGAACGGTAG Protein sequence : MIFRKRDLQHRPVVLRIAGLSLVDGQPGAGSAILRDIDVDIRQGETVCLVGESGSGKSMTSLAVMGLLPKGHLRVTGGRI ELDGQNLLDLGPAALRDLRAKRISMIFQEPMTALNPVMKVGPQIEEVLDSHTALPRREKKQRVLDIMEQVHLPDVARIYE SYPHQLSGGQRQRIMIAMALVLEPRLLIADEPTTALDVTTQNQVLKLISELQHKHDTAVLFITHDMGVVAEIADRVYVMR LGEIVESAPVEQLLREPRQDYTRKLLKSVPSLIPRPGRAAPQACATLQVQGLAKRYAMGGFPGRRREVQAAHDVAFSIQP GRTLGIVGESGSGKSTVARCVMRLIEPSEGAIRVGDADIARLGPRQLKPFRKHLQIVFQDPYRSLNPRRTIGASLIEGPV NFGQDRQAALAQAAELLELVGLPADALARYPHQFSGGQRQRIAIARAIAMRPDVLVADEAVSALDVSVQAQVLELLDTLQ RKLDIAILFITHDLRVAAQICDEVMVMRHGRVVEHDTAENVLARPAHAYTRALIEAAPGRDWDFANFRER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-94 | 45 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-79 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-79 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 3e-79 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-79 | 42 |
