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Name : kdpB (BB3918) Accession : NP_890452.1 Strain : Bordetella bronchiseptica RB50 Genome accession: NC_002927 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase B chain Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 4163356 - 4165521 bp Length : 2166 bp Strand : + Note : ortholog of Bordetella pertussis (BX470248) BP2481 DNA sequence : ATGGCCAACTCCCCTACCCCCCTGTCCGCCCAGGCCGGCCTGCCGGCTGCAAGCCCCTCCCTGCCGGCGGCCACGCCGCA TCGCGCGTTCGGCCTGTGGTCGCGCGCGCTGGCCGGCCCCGCCCTGCGCGACACCCTGCGCAAACTGTCGCCGGCCGCCC AGTTGCGCAACCCCGTCATGTTCGTCGTCTACGCCGGCAGCATCCTGACCACCCTGTTGTGGCTGCTGGCCCTGGCCGGC CTGGCCGAGGCCCCCGCGGGCTTCATCCTCGCCGTCGCGGCCGGCCTCTGGTTCACCGTGCTGTTCGCCAACTTCGCCGA GGCATTGGCCGAGGGGCGCGGCAGGCAGCAGGCCGCCGCCCTGCGCGGCTTGCGCACCACCATCGAGGCGCGGGTGCTGA CAGGCTTTCGCGATAGCGACGCCGCCGCAGCGCTGCCGCCGTACTGGCGCTCGCGCGCCACCTCGCGCCCCTCGGGCGCG CTGCGCAGGGACGACGTGGTCCTGATCGAAGCGGGCGAAACCGTGCCGGGCGACGGGCAGGTGATCGCCGGCATCGCCTC GGTCGACGAAAGCGCCATCACCGGCGAATCGGCGCCGGTGATCCGCGCGGCCGGCAGCGATTTCTGCTCGGTCACCGGCG GCACGCGCGTCCTGTCCGACTGGATCTTCGTGCGCATCGCGGCCGACCCTGGCGACAGCTTCCTCGACCGCATGATCGCC ATGGTGGAAAGCGCCCGCCGCCAGAAAACCCCCAATGAGCTGGCGCTGACCATCCTGCTGGTGGGCCTGACGCTGGTGTT CCTGCTGGTCGTGGCCAGTCTGCTGCCGTTCTCGATGTACGCGGTGTCCGCCTCGGGCGCGGGGCAGGCTGTGTCGATCA CCGTGCTGGTGGCCCTGCTGGTCTGCCTGATCCCCACCACCATCGGCGGCCTGCTGTCGGCCATCGGCGTGGCGGGCATG AGCCGCATGATGCGGGCCAACGTCATCGCCACCTCGGGGCGCGCGATCGAGGCGGCCGGCGATGTCAGCGTCCTGCTGCT GGACAAGACCGGCACGATCACGTTCGGCAATCGCCAGGCCGCGGCCTTCGTCCCCGCGCCGGGGGTATCCCCGGCGGTGC TGGCCGAGGCCGCGCGGCTGGCGTCGCTGGCCGACGAAACGCCCGAGGGCCGCAGCATCGTCGCCCTGGCCGAGCGCATC CTGGACACCCGCAGCGAGGCGCCCGCCGGCGCGCGCTTCGTGCCGTTCTCCGCCCAGTCGCGCATGAGCGGCGTGGACCT CGACGGCCGCCTTATCCGCAAGGGAGCGGCCGACGCCCTGGCACGCTGGCTGGGCGAAGGACAGGGCGGCCTGCCCGCCG CCGTGGCGCGCGACGTGGACGACGTGGCGCGCCGCGGCAGCACGCCCCTGGTGGTCGCCGAAGGCGGGCAGGCGCTGGGC GTGATCGAGCTCAAGGACATCGTCAAGCCCGGGATCCAGCCGCGCTTTGCCGCGTTGCGCCGCATGGGCATCAAGACGGT CATGATCACCGGCGACAACGCCCTGACCGCGGCCGCCATCGCCGCCGAGGCCGGCGTGGACGACTTCCTGGCCGAAGCCA CCCCGCAAGCCAAGCTGGAACTGATCCGCGCCTGCCAGGCCGACGGCCATCTGGTGGCCATGACGGGCGACGGCACCAAC GATGCGCCGGCGCTGGCCCAGGCCGACGTGGCGGTCGCCATGAACTCCGGCACGCAGGCCGCCAAGGAGGCCGGCAACAT GGTGGACCTGGACTCCAACCCCACCAAGCTGATCGAAATCGTCGAAATCGGCAAGCAGATGCTGATGACGCGCGGCGCGC TCACCACCTTCAGCGTCGCCAACGACGTCGCCAAGTACTTCGCCATCATTCCCGCGGCATTCATGGCGGTGTACCCGCAG CTGGCGCAACTCAATGTGATGGGCCTGGCCACCCCCGCCTCGGCCATTCTTTCGGCCGTCATTTTCAACGCCCTGATCAT CGTGGCCCTGATTCCGCTGGCGCTCAAGGGCGTGCGCTACCGCCCGCTCGGCGCGGCGGTGCTGCTGCGCCGCAACCTGC TGGTCTATGGACTGGGCGGGCTGCTGGCGCCCTTTGCCGGCATCAAACTGATCGACATGGCGCTGGCCGCCCTGGGCTGG ACCTGA Protein sequence : MANSPTPLSAQAGLPAASPSLPAATPHRAFGLWSRALAGPALRDTLRKLSPAAQLRNPVMFVVYAGSILTTLLWLLALAG LAEAPAGFILAVAAGLWFTVLFANFAEALAEGRGRQQAAALRGLRTTIEARVLTGFRDSDAAAALPPYWRSRATSRPSGA LRRDDVVLIEAGETVPGDGQVIAGIASVDESAITGESAPVIRAAGSDFCSVTGGTRVLSDWIFVRIAADPGDSFLDRMIA MVESARRQKTPNELALTILLVGLTLVFLLVVASLLPFSMYAVSASGAGQAVSITVLVALLVCLIPTTIGGLLSAIGVAGM SRMMRANVIATSGRAIEAAGDVSVLLLDKTGTITFGNRQAAAFVPAPGVSPAVLAEAARLASLADETPEGRSIVALAERI LDTRSEAPAGARFVPFSAQSRMSGVDLDGRLIRKGAADALARWLGEGQGGLPAAVARDVDDVARRGSTPLVVAEGGQALG VIELKDIVKPGIQPRFAALRRMGIKTVMITGDNALTAAAIAAEAGVDDFLAEATPQAKLELIRACQADGHLVAMTGDGTN DAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLIEIVEIGKQMLMTRGALTTFSVANDVAKYFAIIPAAFMAVYPQ LAQLNVMGLATPASAILSAVIFNALIIVALIPLALKGVRYRPLGAAVLLRRNLLVYGLGGLLAPFAGIKLIDMALAALGW T |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 3e-148 | 58 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 2e-148 | 58 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 2e-127 | 52 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-127 | 52 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-127 | 52 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-127 | 52 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-127 | 52 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 4e-128 | 52 |
