Gene Information

Name : BB3914 (BB3914)
Accession : NP_890448.1
Strain : Bordetella bronchiseptica RB50
Genome accession: NC_002927
Putative virulence/resistance : Resistance
Product : mebrane transport protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2076
EC number : -
Position : 4158081 - 4158413 bp
Length : 333 bp
Strand : +
Note : ortholog of Bordetella pertussis (BX470248) BP2476

DNA sequence : 
ATGAACAGCTGGATCCATCTGTCGGTGGCCATCGTGGCCGAAATCATCGCCACCAGCGCCCTGAAAAGCTCGGAGGGCTT
CACCCGCCTGCTCCCCTCGCTGGTCACCGTGGCGGGCTACGCGATCGCGTTCTACTTCCTGGCCCTCACGCTGCGGGTCA
TCCCGGTGGGGGTCGCCTACGCCATCTGGTCCGGCGTGGGCATCGTGCTGATCTCGCTGGTTGGCGCGCTGTTGTTCAAG
CAGCACCTGGACCTGCCCGCCATCATCGGCATCGCGCTGATCCTGGCGGGCGTGGTGGTCATGAACGTGTTCTCGAAGTC
CGTCGGCCACTGA

Protein sequence : 
MNSWIHLSVAIVAEIIATSALKSSEGFTRLLPSLVTVAGYAIAFYFLALTLRVIPVGVAYAIWSGVGIVLISLVGALLFK
QHLDLPAIIGIALILAGVVVMNVFSKSVGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 6e-21 64
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 6e-21 64
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 6e-21 64
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 9e-21 64
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 6e-21 64
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 6e-21 64
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 6e-21 64
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 9e-21 64
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 6e-21 64
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 6e-21 64
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 6e-21 64
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 9e-21 64
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 6e-21 64
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 6e-21 64
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 6e-21 64
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 6e-21 64
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 6e-21 64
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 6e-21 64
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 6e-21 64
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 6e-21 64
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 6e-21 64
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 6e-21 64
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 9e-21 64
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 6e-21 64
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 6e-21 64
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 6e-21 64
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 9e-21 64
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 6e-21 64
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 6e-21 64
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 6e-21 64
unnamed CAD42068.1 hypothetical protein Not tested PAI II 536 Protein 4e-11 45
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 4e-14 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BB3914 NP_890448.1 mebrane transport protein BAC0322 Protein 3e-21 64
BB3914 NP_890448.1 mebrane transport protein BAC0323 Protein 3e-21 64
BB3914 NP_890448.1 mebrane transport protein NC_010410.6003348.p0 Protein 1e-21 63
BB3914 NP_890448.1 mebrane transport protein BAC0002 Protein 1e-21 63
BB3914 NP_890448.1 mebrane transport protein CP001138.1.gene1489. Protein 7e-20 62
BB3914 NP_890448.1 mebrane transport protein BAC0324 Protein 2e-21 60
BB3914 NP_890448.1 mebrane transport protein BAC0150 Protein 4e-16 59
BB3914 NP_890448.1 mebrane transport protein NC_002695.1.913273.p Protein 4e-16 59
BB3914 NP_890448.1 mebrane transport protein BAC0377 Protein 9e-18 54
BB3914 NP_890448.1 mebrane transport protein CP004022.1.gene1549. Protein 5e-18 52
BB3914 NP_890448.1 mebrane transport protein BAC0139 Protein 2e-14 47
BB3914 NP_890448.1 mebrane transport protein AE000516.2.gene3301. Protein 1e-09 46
BB3914 NP_890448.1 mebrane transport protein BAC0249 Protein 1e-09 46
BB3914 NP_890448.1 mebrane transport protein BAC0327 Protein 2e-16 45
BB3914 NP_890448.1 mebrane transport protein BAC0329 Protein 2e-16 45
BB3914 NP_890448.1 mebrane transport protein BAC0325 Protein 3e-16 44
BB3914 NP_890448.1 mebrane transport protein BAC0140 Protein 7e-12 44
BB3914 NP_890448.1 mebrane transport protein BAC0321 Protein 2e-17 43
BB3914 NP_890448.1 mebrane transport protein BAC0477 Protein 5e-07 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BB3914 NP_890448.1 mebrane transport protein VFG1587 Protein 2e-11 45
BB3914 NP_890448.1 mebrane transport protein VFG1586 Protein 2e-14 44