|
Name : rpmE2 (BB3261) Accession : NP_889797.1 Strain : Bordetella bronchiseptica RB50 Genome accession: NC_002927 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L31 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0254 EC number : - Position : 3490791 - 3491057 bp Length : 267 bp Strand : + Note : RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially g DNA sequence : ATGAAAGAAGGCATTCACCCCGAATACCGCGAAGTGGTGTTCATGGACGTTCAGACGGGCAACAAGTTCATCACCCGCTC GACCATCCACACCCGCGAAACCGTCGAAATGGACGGCAAGACGTACCCGCTCTTCAAGTGCGACGTGACGTCCGAATCGC ACCCGTTCTACACCGGCGCGCAGACGCGTATCGTCGAGACCGGCCGCGTGGAAAAATTCCGCGCCCGCTTCGCCCGCACC GCCGGGACGGTCAAGTCGGCGTCCTGA Protein sequence : MKEGIHPEYREVVFMDVQTGNKFITRSTIHTRETVEMDGKTYPLFKCDVTSESHPFYTGAQTRIVETGRVEKFRARFART AGTVKSAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rpmE2 | NP_286687.1 | 50S ribosomal protein L31 | Not tested | TAI | Protein | 9e-13 | 46 |
| rpmE2 | NP_287095.1 | 50S ribosomal protein L31 | Not tested | TAI | Protein | 9e-13 | 46 |
