Gene Information

Name : BB3182 (BB3182)
Accession : NP_889718.1
Strain : Bordetella bronchiseptica RB50
Genome accession: NC_002927
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3397094 - 3397765 bp
Length : 672 bp
Strand : +
Note : ortholog of Bordetella pertussis (BX470248) BP2205

DNA sequence : 
ATGACTCATTTGCTATTGGTGGAAGACGACCCGATGCTGGGCGACGCGCTGCAGACCGCGCTGCAGCGCGAACTCGGCGC
CCGGGTCGATTGGGTGCGCGACGGCGCGCAGGCGCAGCTTGCGCTGGTCGACCACGCCTACCAGCTGATCCTGCTGGACA
TAGGCCTGCCCGGCCAGTCCGGCTTGGCGCTGCTGCGCGCGCTGCGCGAGGGCTACGACACCACCCCGGTGCTGCTGGTG
ACCGCGCGCGACCAGCTCAGCGACCGCATCCGCGGCCTGGACGGCGGCGCCGACGACTACATCGTCAAGCCGTTCGAACT
GGACGAACTGCTGGCGCGCCTGCGCGCCGTGCTGCGCCGCAGCCACAACCAGGTGGCGCCGCTCATGCGGCATGGCGAGC
TGCTGGTGGACCCGGCGGCGCGCCAGGTGTCGCGCGCGGGCCGGCCCGTCGCGCTCAGCCAGAGCGAATACCGCACGCTA
CTGGCGCTGATGCAGCGGCGCGGCCGCACGGTCTCGCGCGAGCAGCTGGAGCACGATGTCTACGGCGCCAGCGTGGCGCT
GGAAAGCAACACGGTCGCCGTGTACGTGCACCAGTTGCGGCGCAAGCTGGGCGACGACCTGATCGAGACGGTGCACGGCT
ACGGCTATCGCATCGGCCAGGAAGGCGCATGA

Protein sequence : 
MTHLLLVEDDPMLGDALQTALQRELGARVDWVRDGAQAQLALVDHAYQLILLDIGLPGQSGLALLRALREGYDTTPVLLV
TARDQLSDRIRGLDGGADDYIVKPFELDELLARLRAVLRRSHNQVAPLMRHGELLVDPAARQVSRAGRPVALSQSEYRTL
LALMQRRGRTVSREQLEHDVYGASVALESNTVAVYVHQLRRKLGDDLIETVHGYGYRIGQEGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-25 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BB3182 NP_889718.1 two-component response regulator BAC0487 Protein 1e-24 43
BB3182 NP_889718.1 two-component response regulator NC_002516.2.879194.p Protein 2e-24 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BB3182 NP_889718.1 two-component response regulator VFG0473 Protein 2e-27 45
BB3182 NP_889718.1 two-component response regulator VFG0596 Protein 1e-25 42