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Name : prpR (BB3126) Accession : NP_889662.1 Strain : Bordetella bronchiseptica RB50 Genome accession: NC_002927 Putative virulence/resistance : Unknown Product : propionate catabolism operon regulatory protein Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 3334857 - 3336785 bp Length : 1929 bp Strand : + Note : - DNA sequence : ATGCCCGCGCTTTCCGCCGCGCAGCCCCTGCCGCGCCTGTGCTTCGTCAGCTACCGCCAGATCCGCGAATTCGCCGCCCC GGTGATCGCCGAATACCGCAACCGGGCCGCCATCGACGTAGTGGACGGCACCTTCGCCGATGCCCTGGCGGTCGCGCGCG ACCGCATCGAGCGCAATGCGGTCGACGCCTTCATCAGCGCGGGCGCCAACGCCAGCATCCTGCGCGCCAACCTGCAGGCC CCGGTGGCCACCATCCAGCTGGGCGGCTTCGATCTGCTGCAGGCCCTCATCCGGGCGCGGCGCATCGCTAGCCGGGTCGG GGTGGTCATGTACGGCCAGACGCTGCCCGAGCTCGATGCCGTCAAGGAGCTGCTCAATATCGAGATCACCCAGTACGCCT ACCAGACGCCATATCACGCCCGCCAGGGCTTCGAACAGCTGCGGCGCGACGGCTTCCAGGTGATCGTGGGCTCCAGCCTG GTGGTCGAGCTGGCCGAGGAAGCGGGCCTGCGCGGCATCCTCGCCTATTCGCTGGCGAGCATACGCCAGGGGTTCGAGGA CGCCATCGAGCTGGCGCGCGTGGCGCGCCTGGAGGCCGGCCGCTACGAGCAGCTCAATGGCGTGCTGCACAACCTGCAGG AGGCGGTGCTGGCGGTCGACCGCGACCACCGCATCATCGCCGTCAATCCGCCCATGCGCGAGCTGCTGGGCATGCCCAAC CGCACGCTGCTGGGACAGCGCCTGGATGCCGTCGAACCCGAGCTGTCGCTGCAGCCCACGCTGGACTCGGGCCGGGCCGA GCGCGCCGCCGTGCAGCGCTACGCCAGGCGCGACTGGATCGCCAATCGCACGCCCATTCTCGAGTACGGCAAGCTGGTCG GCGCCGCCCTGACCCTGTATGACGCGCACCGCATCCAGGAGGCCGACAGCAGCTTGCGCATGCAGCAACGCCGTCGCCAG AGCGCGGCCCGCCACCGCTTCGACACCCTGCTCGGGCAAAGCCCCGCGTTCATGCGCGCCGTCGACACCGCGCGCCGCTA CGCCGGCACCGACCTGCGCGTGCTGATCCAGGGCGAAAGCGGCGTCGGCAAGGAGCTGTTCGCCCAGTCGATCCACAACG CCAGCGCGCGCGCCCACCGCCCCTTCGTCGCCATCAATTGCGCGTCGCTGCCCGAAACCCTGCTCGAGAGCGAACTGTTC GGCTACGAGGACGGCGCCTTCACCGGGTCGCGCCGCGACGGCAAGCGCGGCCTGATCGAGGCCGCGCATACGGGCACGCT GTTTCTCGATGAGATCGGCGACATGCCGCTGTCGCTGCAGACGCGCCTGCTGCGCGTGCTGCAGGAAGGCGAAATCACGC GCCTGGGCGCCACCACGCCGGTGCCGGTGGACGTGCGCGTGCTGGCCGCCACCCATCAGCCGCTGCAGGAGCTGGTGGCC CAGCGACGCTTCCGCCAGGATCTGTACTACCGCATCAACGCCCTGCGGCTGCCGCTGCCGCCCTTGCGCGAGCGCGGCGC CGACATCGCCTTGCTGGCGACCCGCCTGGTTGCGCGCTGCCTGGACCGGCTGGGCTCGCCCCTGGACGCCGAGGCCGCGC TCGCCGCCCTGCTGCCGCGGCTGGCCGCCTATCCCTGGCCGGGCAACGTGCGCGAGCTGGAGAACCTGTGCGAGCGGATC GCGGTGTTCCTGCTGCAGTTCGACGACGCCGAGGCGATCCGCCATGACGCCTTGCGCCACGAATGCCCCGAGCTGTTCGA GCACCCCGCCGCCATGGACGCGCCGCGTCCGGAGCGCATCGCGCAGGCCCTGCGCCAGGCCGATGGCAATCGCGCACAGG CCGCCGCGCAGCTGGGCGTGAGCCGCTCGACGCTGTGGCGCTGGCTCAGGCAGATCGACGCCGCCGACGATGGCGCGCGC GCGACTTGA Protein sequence : MPALSAAQPLPRLCFVSYRQIREFAAPVIAEYRNRAAIDVVDGTFADALAVARDRIERNAVDAFISAGANASILRANLQA PVATIQLGGFDLLQALIRARRIASRVGVVMYGQTLPELDAVKELLNIEITQYAYQTPYHARQGFEQLRRDGFQVIVGSSL VVELAEEAGLRGILAYSLASIRQGFEDAIELARVARLEAGRYEQLNGVLHNLQEAVLAVDRDHRIIAVNPPMRELLGMPN RTLLGQRLDAVEPELSLQPTLDSGRAERAAVQRYARRDWIANRTPILEYGKLVGAALTLYDAHRIQEADSSLRMQQRRRQ SAARHRFDTLLGQSPAFMRAVDTARRYAGTDLRVLIQGESGVGKELFAQSIHNASARAHRPFVAINCASLPETLLESELF GYEDGAFTGSRRDGKRGLIEAAHTGTLFLDEIGDMPLSLQTRLLRVLQEGEITRLGATTPVPVDVRVLAATHQPLQELVA QRRFRQDLYYRINALRLPLPPLRERGADIALLATRLVARCLDRLGSPLDAEAALAALLPRLAAYPWPGNVRELENLCERI AVFLLQFDDAEAIRHDALRHECPELFEHPAAMDAPRPERIAQALRQADGNRAQAAAQLGVSRSTLWRWLRQIDAADDGAR AT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01495.1 | propionate catabolism operon regulator prpR | Not tested | PAGI-1 | Protein | 3e-96 | 45 |
