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Name : thiC (BB0304) Accession : NP_886853.1 Strain : Bordetella bronchiseptica RB50 Genome accession: NC_002927 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 307181 - 309094 bp Length : 1914 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAACGCCAACCCCAAGTTCCTGGCCGCCACGGCCGAGGTCGACGCAGCCGCCGTCGCGCCGTTGCCCAAATCCCGCAA AGTCTACGAAACCGGCTCGCGCCCGGATATCCGCGTGCCGTTTCGCGAGATCGAGCAGGCCGACACGCCCACCATGTTCG GCGGCGAGAAGAACCCGCCCCTGACCGTCTACGATACCAGCGGCCCGTACACCGACCCGCAGGCCAGCATCGACATCCGC CGCGGCCTGCCGGCCCTGCGCCGGGCCTGGATCGAAGAACGCGGCGACACCGAAGTGCTGGATGGCCCGACCAGCGACTA CGGCAAGGAGCGCCTGACCGATCCGAAGCTGACGGCGATGCGCTTCGACCTGCAGCGCCCCCCGCGCCGCGCGCGCGCCG GCGCCAACGTGACGCAGATGCACTATGCGCGCCGCGGCATCGTCACGCCCGAAATGGAATTCATCGCGCTGCGCGAAAAC CTGCGCCGCGAACACTACCTGGAAACGCTGCGCGCCAGCGGCCCGGATGGCGAGAAACTGGCCAAGCGCCTGCTGCGCCA GCACCCCGGCCAGTCGTTCGGCGCCGCCCTCCCGTCGGCCATCACGCCCGAATTCGTCCGCGAGGAAGTCGCGCGCGGCC GCGCCATCATCCCGGCCAACATCAACCACCCGGAAATCGAACCGATGATCATCGGCCGCAATTTCCTGGTGAAGATCAAC GCCAACATCGGCAACTCGGCCGTCAGCTCCGGCATCGGCGAGGAAGTCGAGAAGATGACCTGGGCGATCCGCTGGGGCGG CGATACGGTCATGGACCTGTCGACCGGCAAGCACATCCACGAAACGCGCGAATGGATCATCCGCAATTCGCCGGTGCCGA TCGGCACGGTGCCGATCTACCAGGCGCTGGAGAAGGTCGACGGCAAGGCCGAGGAACTGACCTGGGAAATCTTCCGCGAC ACGCTGATCGAGCAGGCCGAGCAAGGCGTGGACTACTTCACGATCCATGCCGGCGTGCGCCTGCCCTTCATCCCCATGAC GGCCGACCGCATGACCGGCATCGTCTCGCGCGGCGGCTCGATCATGGCCAAGTGGTGCCTGGCGCACCACAAGGAGAGCT TCCTGTACGAGCGCTTCGAGGAAATCTGTGAAATCATGAAGGCCTACGACGTCAGCTTCTCGCTGGGCGACGGCCTGCGC CCCGGCTCGGGCTACGACGCCAACGACGAGGCGCAGTTCGCCGAGCTCAAGACCCTGGGCGAGCTGACCCAGGTGGCCTG GAAGCACGACGTGCAGGTCATGATCGAAGGCCCCGGCCACGTGCCGATGCAGATGATCAAGGAAAACATGGAACTGCAGC TCAAGCATTGCGACGAGGCGCCGTTCTATACCCTGGGCCCGCTGACCACCGACATCGCGCCCGGCTACGACCACATCACC TCGGGCATCGGCGCGGCCCTGATCGGCTGGTACGGCACGGCCATGCTGTGCTACGTGACGCCCAAGGAGCACCTGGGCCT GCCCAACAAGAAGGACGTCAAGGACGGCATCATCACCTACAAGATCGCCGCCCATGCCGCCGACCTGGCCAAGGGACATC CGGGCGCGGCCATCCGCGACAACGCACTGTCGAAGGCGCGCTTCGAGTTCCGCTGGGACGACCAGTTCAACCTGGGCCTG GATCCGGACACCGCCAAGGAGTTCCACGACGAGACCCTGCCCAAGGACTCGATGAAAGTGGCGCACTTCTGCTCGATGTG CGGGCCGCATTTCTGCAGCATGAAGATCACGCAGGATGTGCGCGACTATGCCGCGGCGCAGGGCGTCAGCGAAAAGGACG CGCTGCAGCAGGGCATGCAGGAAAAGGCGGTGGAGTTCGTCAAGAAGGGCGCCGAGGTCTATCACCGGACCTGA Protein sequence : MNANPKFLAATAEVDAAAVAPLPKSRKVYETGSRPDIRVPFREIEQADTPTMFGGEKNPPLTVYDTSGPYTDPQASIDIR RGLPALRRAWIEERGDTEVLDGPTSDYGKERLTDPKLTAMRFDLQRPPRRARAGANVTQMHYARRGIVTPEMEFIALREN LRREHYLETLRASGPDGEKLAKRLLRQHPGQSFGAALPSAITPEFVREEVARGRAIIPANINHPEIEPMIIGRNFLVKIN ANIGNSAVSSGIGEEVEKMTWAIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVDGKAEELTWEIFRD TLIEQAEQGVDYFTIHAGVRLPFIPMTADRMTGIVSRGGSIMAKWCLAHHKESFLYERFEEICEIMKAYDVSFSLGDGLR PGSGYDANDEAQFAELKTLGELTQVAWKHDVQVMIEGPGHVPMQMIKENMELQLKHCDEAPFYTLGPLTTDIAPGYDHIT SGIGAALIGWYGTAMLCYVTPKEHLGLPNKKDVKDGIITYKIAAHAADLAKGHPGAAIRDNALSKARFEFRWDDQFNLGL DPDTAKEFHDETLPKDSMKVAHFCSMCGPHFCSMKITQDVRDYAAAQGVSEKDALQQGMQEKAVEFVKKGAEVYHRT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 74 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 74 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 73 |
