Gene Information

Name : BB3005 (BB3005)
Accession : NP_889541.1
Strain : Bordetella bronchiseptica RB50
Genome accession: NC_002927
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 3210055 - 3210768 bp
Length : 714 bp
Strand : -
Note : ortholog of Bordetella pertussis (BX470248) BP1734

DNA sequence : 
ATGGCGGCAAGGCAAGGTGCGAGCAAACGGAAAACAATGCGCATGGATAACGGCAACTCGATTGAAGTGAAAGGGCTGGG
CAAGCGTGTGGCCGACGCCGGCGGTGAACTGTCGATCCTCGATGGCATCGATTTTACGGTCCGGGCCGGCAGCGCCGTGG
CCATCACCGGCAGTTCCGGCTCGGGCAAGTCCACCTTGCTCGGACTGCTGGCGGGCCTGGACGTTCCCTCGTCGGGCAGC
GTGCACCTGGCCGGCCAGGATCTTTTCGCCCTCGACGAGGATGGCCGGGCGCGCCTGCGCGCCAGCCATGTGGGCTTCGT
ATTCCAGTCTTTCCAGCTGCTGCCCAACCTCACGGCGCTGGAAAACGTCATGTTGCCGCTGGAGCTGGCCGGCCAGCCGG
CGCGCGAGGCGGCGCAGGCGATGCTGCGGCGGGTAGGCCTGGGCGAGCGGCTGCACCACTACCCGCGTACGTTGTCCGGG
GGCGAGCAGCAGCGGGTGTCGCTGGCGCGCGCCTTCGTGGTCCAGCCCGATCTGCTGTTCGCCGACGAGCCCACCGGCAG
CCTCGATGCGGCCACCGGCGAAACCGTCATCGACCTGATGTTCGATCTGCACCGCGAGCACGGCACGACGCTGGTGCTGG
TCACCCACGACCCCGAACTGGCCGCGCGCTGCGGCCGGCAACTGGTGCTGGCCGCGGGCCGCCTGCAGGACTGA

Protein sequence : 
MAARQGASKRKTMRMDNGNSIEVKGLGKRVADAGGELSILDGIDFTVRAGSAVAITGSSGSGKSTLLGLLAGLDVPSSGS
VHLAGQDLFALDEDGRARLRASHVGFVFQSFQLLPNLTALENVMLPLELAGQPAREAAQAMLRRVGLGERLHHYPRTLSG
GEQQRVSLARAFVVQPDLLFADEPTGSLDAATGETVIDLMFDLHREHGTTLVLVTHDPELAARCGRQLVLAAGRLQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-27 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 46
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BB3005 NP_889541.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 8e-34 46
BB3005 NP_889541.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-30 45