Gene Information

Name : rph (BB2961)
Accession : NP_889497.1
Strain : Bordetella bronchiseptica RB50
Genome accession: NC_002927
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 3150780 - 3151520 bp
Length : 741 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
GTGAGCACTTCCGCCGCCGATACTCTTTCCCGTCCGTCCGGCCGCGCCGTCGACGCCTTGCGGCCGTTCAGCCTGGAGCG
CGGCTTCACGCGTTATGCCGAAGGCTCGGTGCTGGTGCGCGCGGGCAATACGCATGTGCTGTGCACGGCCAGCGTGCTCG
AGAAGGTGCCGCCGTTTCTCAAGGGCCGCGGCGAAGGCTGGGTGACCGCCGAGTACGGCATGCTGCCGCGCGCCACGCAT
ACGCGCGGCGACCGCGAGGCCGCGCGCGGCAAGCAAAGCGGCCGCACCCAGGAAATCCAGCGCCTGATCGGCCGCAGCCT
GCGCGCGGTGTTCGACCTGCGCCTGCTGGGCGAACGCACCCTGCACCTGGATTGCGACGTGCTGCAGGCCGACGGCGGTA
CGCGTTGCGCCAGCATCACGGGCGCCTGGGTGGCCGCCGCCGACGCCGTGGCGCTGCTGATGCAGCGCGGCGACCTGGCG
CACAACCCGATCCGCGACGCGGTCGCCGCCGTGTCGGTCGGCCTGGTGGATGGACGCGCGGTGCTGGACCTGGATTACCA
GGAAGATTCGGCCTGCGCGGCCGACGTCAATGTGGTGATGACCGGCAGCGGCGCATTCGTCGAAGTGCAGGGCACCGGCG
AGGGCGCCACCTTCACGCGCGGCGAACTCGACACGATGCTGGGGCTGGCCGAAGGCGGCATCGCCCAGCTCGTGCGGGCG
CAGCGCGAGGCACTGCAGTAA

Protein sequence :
MSTSAADTLSRPSGRAVDALRPFSLERGFTRYAEGSVLVRAGNTHVLCTASVLEKVPPFLKGRGEGWVTAEYGMLPRATH
TRGDREAARGKQSGRTQEIQRLIGRSLRAVFDLRLLGERTLHLDCDVLQADGGTRCASITGAWVAAADAVALLMQRGDLA
HNPIRDAVAAVSVGLVDGRAVLDLDYQEDSACAADVNVVMTGSGAFVEVQGTGEGATFTRGELDTMLGLAEGGIAQLVRA
QREALQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 9e-57 59