Gene Information

Name : wbpP (BB2924)
Accession : NP_889460.1
Strain : Bordetella bronchiseptica RB50
Genome accession: NC_002927
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 3102623 - 3103648 bp
Length : 1026 bp
Strand : -
Note : ortholog of Bordetella pertussis (BX470248) BP1630

DNA sequence : 
ATGACGACACGATACGAGGATTTGCGCGCGACCCTGCCGCGTGCGCCGGAAAAATGGCTGGTGACCGGCTGCGCCGGCTT
CATCGGCTCGAACCTGCTCGAGACGCTGCTCGGGCTGGACCAGGCGGTGGTGGGGCTGGACAACTTCGCCACGGGGCACC
AGCACAACCTGGACGAGGTGCGCGCGGCGGTGACGCCCGAGCAATGGGCGCGCTTCACCTTCATCGAAGGCGACATCCGC
GACCTGGCGGCCTGCCAGCGCGCCGTGCAGGGCGTGGACCGGGTGCTGCACCAGGCCGCGCTGGGTTCGGTGCCGCGTTC
GCTGAAAGACCCGATCACGACCAACGAGGTCAACATCGGCGGTTTCCTGAACATGCTGGTGGCCGCGCGCGACGCGCAGG
TCCAGGCGTTCGTCTATGCGGCCTCGAGCTCGACCTACGGCGACCATCCCGACCTGCCCAAGGTCGAGGACCGCATCGGC
AATCCGCTCTCGCCGTACGCGGTGACCAAGTACGTCAACGAGCTGTACGCCGACGTGTTCGCGCGCTCGTACGGGTTTTC
CAGCGTGGGGCTGCGCTACTTCAACGTGTTCGGCAAGCGCCAGGACCCGGACGGCGCGTACGCGGCGGTGATTCCGAAGT
GGACGGCGGCGATGATCAAGGGCGAGGACGTCGTGATCAACGGCGACGGCCAGACCAGCCGCGACTTCTGCTTCGTGGAG
AACGCGGTGCAGGCCAACCTGCTGGCGGCGATGGCCGCACCGGAAGGCGCGAACCAGGTCTACAACGTGGCGTACAACGC
GCGCACGACGCTGACCGAGCTGTTCGAGCACCTGCGGCGCGCGCTGGCCGGGCAGGGCGTGTCGTACGAGAAGGCGCCGG
TGTACGCGGAATTCCGCGCCGGCGACGTGCGCCACTCGCAGGCCGACATCGGCAAGGCCGGCAAGCTGCTGGGCTACGAG
CCGGCCTACGACATCCTGCGCGGGCTGGAAGCCGCCATGCCCTGGTACAAGCAGTTCCTGCGATGA

Protein sequence : 
MTTRYEDLRATLPRAPEKWLVTGCAGFIGSNLLETLLGLDQAVVGLDNFATGHQHNLDEVRAAVTPEQWARFTFIEGDIR
DLAACQRAVQGVDRVLHQAALGSVPRSLKDPITTNEVNIGGFLNMLVAARDAQVQAFVYAASSSTYGDHPDLPKVEDRIG
NPLSPYAVTKYVNELYADVFARSYGFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVE
NAVQANLLAAMAAPEGANQVYNVAYNARTTLTELFEHLRRALAGQGVSYEKAPVYAEFRAGDVRHSQADIGKAGKLLGYE
PAYDILRGLEAAMPWYKQFLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 7e-101 64
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 7e-101 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
wbpP NP_889460.1 capsular polysaccharide biosynthesis protein VFG0430 Protein 3e-101 64