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Name : BB1816 (BB1816) Accession : NP_888361.1 Strain : Bordetella bronchiseptica RB50 Genome accession: NC_002927 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 1919865 - 1921541 bp Length : 1677 bp Strand : + Note : ortholog of Bordetella pertussis (BX470248) BP1986 DNA sequence : ATGACCGCGTCCGCGCCTTTGCTGCGCATCGAAGGGCTGGATGTCGACGTGGCCGGCGAGTCCGGCGTCACGCATGCCGT CAAGCGGCTGCAGCTGGCCGTGGCGCAGGGCGAGACCTTCGCCCTGGTCGGCGAGTCGGGCAGCGGCAAGAGCATGACCG CGCTGGCCCTGCTGCGGCTGCTGCCCGATGCCGGGCGCATCGTCGGCGGCCAGATCGAACTGGGCGGCACCGACCTCAAC GACCTGTCCGAGCGCGCCATGCGCGGCGTGCGCGGCGGACGCATCGGCATCATCTTCCAGGAGCCCGCCACCAGCCTGAA TCCCGTGATGCGGGTGGGCGACCAGATCGTCGAGACCCTGGCCGCCCATACGCCCTTGCGCGGCGCGGCGGCGCGCGAGC GGGCCATCGACTGGCTGCGGCGCGTCGGCATCCCCGAGCCCGAGCGGCGCATCGATGACTATCCGTTCCAGTTCTCGGGC GGCCAGAAACAGCGCCTGATGATCGCCATCGCGCTGGCGGCCGAGCCCAAGCTGCTGATCGCCGACGAGCCCACCACGGC GCTCGACGTCACCGTGCAGGCCCAGGTGCTGGAGCTGCTGGCCGGCATCCAGCGCGAGATGGGCATGGCGGTGCTGCTGA TCACGCACGACCTGGCGGTGGTGCGCAACGTGGCGCATCACGTGGCCCTGATGCGCGGCGGCGAGATCGTCGAAAGCGCC GACGCGCGCACGTTCTTCGAGCGGCCGCGCCATCCCTATGCGCGCGAACTGTTCGAGGCCATTCCCACCTTCGCCAAGCG CGGCCGGCCGCTCTCGGCCCAGGGCCGCGCGGCGGGGCAGGGCAAGGCCGCGCCCGAGGCCGGCGCGGTGGTCCTGGATG TGCAGGACCTGCTGGTGCACTATCCGGTGCGCAAGGGCGTGCTGCGCCGCGTGGCCTCGTGGGTCGAGGCCGTCAACGGC GTCACCTTCACCCTGCGCGCCGGCGAGACCCTGGCGCTGCTGGGCGAATCGGGTTGCGGCAAGACCACCACCGGCAAGGC CTTGCTGCGCCTGGTCGAAGGCGCGCGCGTGCAGGGGCGCGCCATGCTCGATGGGCACGATCTGCTGGGCGCGTCGCGGC GCGAGCTGCGGCGGCTGCGGCAGGACATCCAGATCGTGTTCCAGGATCCCTTCGCGTCGCTCGACCCGCGCATGCGGGTC GGCGATATCCTCGAAGAGGGCATTGCCTCGCTGCGCCCCGAACTGGCCGCTTCGGCGCGCAGGGCGCGGGCCGTGGGCCT GCTGGAGCGGGTGGGGCTGCCGGCCGACACGCCCACGCGCTATCCGCACGAATTCTCGGGCGGCCAGCGCCAGCGCATCG CCATCGCGCGGGCGCTGGCGGTCGAACCGAAGGTGCTGATCTGCGACGAACCCACTTCGGCGCTGGACGTGTCGGTGCAG GCGCAGATCCTCGATCTGCTGCGCGACCTCCAGGCCGAGCTGGGCATCGCCTACCTGTTCATCACGCACAACTTCGGCGT GGTCGAATACCTGGCCGACCGCATCGCGGTCATGCACGGCGGACGCATCGTCGAGATGGGGCCCGCCGACACCGTGCTGC ACGCGCCGCGCCACGAGATGACGCAGCGCCTGCTGGCCGCCGTGCCGCGCCTGCGGTTCGGGGCGGAGAACGCGTAG Protein sequence : MTASAPLLRIEGLDVDVAGESGVTHAVKRLQLAVAQGETFALVGESGSGKSMTALALLRLLPDAGRIVGGQIELGGTDLN DLSERAMRGVRGGRIGIIFQEPATSLNPVMRVGDQIVETLAAHTPLRGAAARERAIDWLRRVGIPEPERRIDDYPFQFSG GQKQRLMIAIALAAEPKLLIADEPTTALDVTVQAQVLELLAGIQREMGMAVLLITHDLAVVRNVAHHVALMRGGEIVESA DARTFFERPRHPYARELFEAIPTFAKRGRPLSAQGRAAGQGKAAPEAGAVVLDVQDLLVHYPVRKGVLRRVASWVEAVNG VTFTLRAGETLALLGESGCGKTTTGKALLRLVEGARVQGRAMLDGHDLLGASRRELRRLRQDIQIVFQDPFASLDPRMRV GDILEEGIASLRPELAASARRARAVGLLERVGLPADTPTRYPHEFSGGQRQRIAIARALAVEPKVLICDEPTSALDVSVQ AQILDLLRDLQAELGIAYLFITHNFGVVEYLADRIAVMHGGRIVEMGPADTVLHAPRHEMTQRLLAAVPRLRFGAENA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-86 | 42 |
