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Name : tktA (BB1380) Accession : NP_887926.1 Strain : Bordetella bronchiseptica RB50 Genome accession: NC_002927 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 1477429 - 1479465 bp Length : 2037 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGAGCAACCCGACCGCCCCTAAACTTGCCTTGGCGGATGCCATCCGCGTACTTGCGATGGACGCCGTGCAGAAAGCGAA TTCCGGACACCCCGGCGCGCCCATGGGAATGGCCGAAATCGCGCAAGCGCTGTGGCTGGGCAACCTGCGCCACAACCCGG CCGATCCGGCCTGGGCCAACCGCGACCGCTTCGTGCTGTCCAATGGCCACGGCTCGATGCTGATCTACGCCCTGCTGCAC CTGACGGGCTACGATCTGCCCCTGGAAGAGCTGAAGAACTTCCGCCAGCTGCATTCGCGCACGCCGGGGCACCCCGAAGT GGGCATCACCCCGGGCGTGGAAACCACCACCGGCCCGCTGGGCCAGGGCCTGGCCAACGCGGTCGGCATGGCGCTGGCCG AGGCCCTGCTGGCGGCCGAATTCAACCGCGCCGGCCACACGGTGGTGGACCACCACACCTATGTCTTCCTGGGCGACGGC TGCCTGATGGAAGGCATCTCGCACGAGGCCTGCTCGCTGGCCGGCACGCTCAAGCTGTCCAAGCTGGTGGCGCTGTACGA CGACAACGGCATTTCCATCGACGGCCATGTCGAGCACTGGTTCGCCGACGACACGGCGACCCGCTTCGAGGGCTACGGCT GGAACGTGATCCGCGGCGTGGACGGCCACGACGTGGCGGCGGTGGACGCGGCCATCAAGCAGGCGCGCGCGCAATCCGAG AAACCCACCCTGATCGTCTGCCGCACCGTGATCGGCAAGGGTTCGCCCAACATGGCCGGCACGCACAATGTGCACGGCGC GCCGCTGGGCAACGACGAGATCGCCGCCACCCGCGCGGCGCTGGGCTGGTCGGCCGGCCCCTTCGAGGTGCCGCAGGATA TCTACGCCGCGTGGGACAGCCGTCCCGCCGGCGCGCTGGCGCAGGCCGCCTGGGAAGACAAGTTCCAGGCCTATGCGGCC CAGTATCCGGCCGAGGCCGCCGAATTCACGCGCCGCATGAAGGGCGAGCTGCCCGAAGGCTTCGCCGCCCGGTTCGAGGC CTTCCTGCAGGCCACCGTGGCCAAGGGCGAGACGGTCGCCACCCGCAAGGCGTCGCAGTTCGCCATCGCCGAGCTGGCCG GCCTGCTGCCGGAGATGCTGGGCGGCTCGGCCGACCTGACCGGCTCGAACTTCACCGACTGGAAGGGCGTGGCGCCGCTG CGCGCCGGCCATCACGGCGTGCATTTCGGCCGCCATATCAACTACGGCGTGCGCGAGTTCGGCATGGCCGCCATCATGAA CGGCATCGCGCTGCATGGCGGCTACCTGCCGTTCGGCGGCACCTTCCTGACGTTCTCGGACTACTCGCGCAACGCCATCC GCATGGCGGCGCTGATGAAGCAGCGCGTGGTGCACGTGTTCACGCACGATTCCATCGGCCTGGGCGAGGACGGTCCGACC CACCAGTCGATCGAACACGCCGCCAGCCTGCGCCTGATTCCCAACCTGTCGGTGTGGCGGCCCTGCGACACCGTCGAGAC GGCCGCCGCCTGGGGCGCTGCCGTGACGCGGCCGGCCAGCATCGGCATGGACGTGCACGACGGCGGCCCGACCGCGCTGC TGCTGTCGCGCCAGAACCTGCCGTTCGTGGCGCGCGACGAGGCCACGCAGAAAGCGATTGTTCGCGGTGGTTACGTCTTG CGCGACGCACACGACGCGCGTGCGGCTATCATCGCCACGGGCTCGGAAGTCGCCATCGCGCTGGCCGCGCAGGAATTGCT GGCCGCCGACGGCATCGCCGTGCGGGTGGTTTCCATGCCCAGCACCGACGTGTTCGACCGCCAGGACGCCGAATGGAAGC GCGAAGTGCTGCCGGCCGGCATGCCGCGCGTGGCCGTCGAGGCGGGCGTGACCGCGTTCTGGCACAAATACGTGGGCCTG GAAGGCGCCGTGGTGGGTATCGACCGCTATGGCGAGTCGGCGCCCGCCGGGGCTTTGTTCAAATTCTTCGGACTGACCGC TGAAAAGGTGGCCGAGGCCGTCAAGCAGGTTTTGTAA Protein sequence : MSNPTAPKLALADAIRVLAMDAVQKANSGHPGAPMGMAEIAQALWLGNLRHNPADPAWANRDRFVLSNGHGSMLIYALLH LTGYDLPLEELKNFRQLHSRTPGHPEVGITPGVETTTGPLGQGLANAVGMALAEALLAAEFNRAGHTVVDHHTYVFLGDG CLMEGISHEACSLAGTLKLSKLVALYDDNGISIDGHVEHWFADDTATRFEGYGWNVIRGVDGHDVAAVDAAIKQARAQSE KPTLIVCRTVIGKGSPNMAGTHNVHGAPLGNDEIAATRAALGWSAGPFEVPQDIYAAWDSRPAGALAQAAWEDKFQAYAA QYPAEAAEFTRRMKGELPEGFAARFEAFLQATVAKGETVATRKASQFAIAELAGLLPEMLGGSADLTGSNFTDWKGVAPL RAGHHGVHFGRHINYGVREFGMAAIMNGIALHGGYLPFGGTFLTFSDYSRNAIRMAALMKQRVVHVFTHDSIGLGEDGPT HQSIEHAASLRLIPNLSVWRPCDTVETAAAWGAAVTRPASIGMDVHDGGPTALLLSRQNLPFVARDEATQKAIVRGGYVL RDAHDARAAIIATGSEVAIALAAQELLAADGIAVRVVSMPSTDVFDRQDAEWKREVLPAGMPRVAVEAGVTAFWHKYVGL EGAVVGIDRYGESAPAGALFKFFGLTAEKVAEAVKQVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 61 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 5e-174 | 58 |
