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Name : BB1005 (BB1005) Accession : NP_887553.1 Strain : Bordetella bronchiseptica RB50 Genome accession: NC_002927 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 1085821 - 1087470 bp Length : 1650 bp Strand : - Note : Similar to Pseudomonas aeruginosa probable ATP-binding protein of ABC transporter pa2061 SWALL:Q9I254 (EMBL:AE004632) (536 aa) fasta scores: E(): 4.5e-71, 46.08% id in 523 aa, and to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase atu5 DNA sequence : ATGCCCGCCCCCCTGCTCTCCATCCGCAATCTCTGCGCCAGCCACGGCCCGGCGCGCGTGCTGCACGACATCAACCTCGA CCTGCAGGCCGGCCAGTCGCTGGGCCTGATCGGCGAGTCCGGCAGCGGCAAGTCGCTGACCGCCCTGGCCTGCCTGGGCC TGACCCCCGACGGCATCGATCCGGTCGGCAGCATCCGCTACCAGGACATCGAACTGATGCAGCTGGACGAGGAAGGCTGG CGGGCCGTGCGCGGGCGCAAGATCGGCATCGTCTTCCAGGACCCCATGGCCTCGCTCAATCCCATCATGACGCTGGGCGC GCAGATCCTGGAGAACCTCAAGCCCATGCCGGGCGACAGCCGCGCCTACCGCAGCGCGCGCGCCATCAAGCTGCTCGACG AAGTCGGCCTGCCCGACCCGGCCGCCATGCTCGGCCGCCACCCCTTCGAACTGTCGGGCGGCCAGCAGCAACGCGCGATG ATCGCCATGACCCTGGCGGCCGAGCCCGCCCTGCTGATCGCCGACGAACCCACCACCGCGCTGGACGTCACCACGCAGGC ACAGATCCTCGGCCTGCTGCGCGGCATCCAGCGCCAGCGGCGGATGGCGATGCTGTTCATCTCGCACGACCTGGACGCCG TGCGGACCATGTCGGACCGCGTCGCCGTCATGTGCGGGGGACGCCTGGTCGAACAGGGCCCGGCCCGCGAAGTCCTGCTT GCCCCGCGGCACGACTACACGCGCACCCTGATGGCCGCGCATGCCCCGCAACCGCTCAAGCGCCGGCACGCCCCGGCCTC GGCCGAAACGGCCATCGAACTGGACGGCGTATGCGTGGACTATGGGCGCTGGAAACCCAAGCGCGCGCTCGAACAGGTGA CGCTGCAAGTACGCGCCGGCGCCACGCTGGGCATCGCCGGCGAATCCGGCTCGGGCAAGAGCACGCTGGCCCAGGCCATC ATGGGGCTGCTCGAACCCAGCGCCGGCTCGGTGCGCGTGTTCGGCCTGAACCCCGCCGCCCGACGCGGCCGGCGCGCGTT CGCAGCCACCTGCCAGTATGTCTTCCAGGATACGTCGGGCAGCCTCAACCCCCGGCGCACCCTGCTGCAGACCCTGTCCG AGCCGCTGCTGGCGCGCGGGCTGCCGCGCGCCAGCCTGCGCGAACACTGCATCGCCATGCTCGAGGACGTGGGCCTGGCC CCCGACCTGCTGGCACGCTTTCCACACCAGATCTCGGGCGGGCAGCGCCAGCGCGTGGTCATCGCCCGCGCGCTGGCCAT GCAGCCGCGCGTGCTCATCTGCGACGAACCGGTCTCGGCGCTGGACGCCAGCGTGCGCAACCAGATCCTCGCGCTGCTGG CCAGGCTGCGCGACCAGCACGGCCTGACGCTGGTCTTCATCGGCCACGACCTGGGCGTCATGGCCTCGCTGGCCGACGAC ATCCTGGTCATGCGGCGCGGCCGCGTGGTCGAGCACGGCGAGGCCGCCCGCGTATTCGCCAACCCGGGCCACCCCTTTAC CCGCGAACTGCTCGACGCGAGCCGCCTGTCGGACACGCCAAGCCCGGCGCCGCAGGCCCGTGCGGCGCGGCGCCAGCCCC GCGCCACCACCCTGGCATCCGGGTTCGGGCAGCAGGCGTTGTTCACCTGA Protein sequence : MPAPLLSIRNLCASHGPARVLHDINLDLQAGQSLGLIGESGSGKSLTALACLGLTPDGIDPVGSIRYQDIELMQLDEEGW RAVRGRKIGIVFQDPMASLNPIMTLGAQILENLKPMPGDSRAYRSARAIKLLDEVGLPDPAAMLGRHPFELSGGQQQRAM IAMTLAAEPALLIADEPTTALDVTTQAQILGLLRGIQRQRRMAMLFISHDLDAVRTMSDRVAVMCGGRLVEQGPAREVLL APRHDYTRTLMAAHAPQPLKRRHAPASAETAIELDGVCVDYGRWKPKRALEQVTLQVRAGATLGIAGESGSGKSTLAQAI MGLLEPSAGSVRVFGLNPAARRGRRAFAATCQYVFQDTSGSLNPRRTLLQTLSEPLLARGLPRASLREHCIAMLEDVGLA PDLLARFPHQISGGQRQRVVIARALAMQPRVLICDEPVSALDASVRNQILALLARLRDQHGLTLVFIGHDLGVMASLADD ILVMRRGRVVEHGEAARVFANPGHPFTRELLDASRLSDTPSPAPQARAARRQPRATTLASGFGQQALFT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-78 | 44 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-78 | 44 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-78 | 44 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-78 | 44 |
