Gene Information

Name : truncated-hlb (SAV2003)
Accession : NP_372527.1
Strain : Staphylococcus aureus Mu50
Genome accession: NC_002758
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3568
EC number : -
Position : 2126122 - 2126991 bp
Length : 870 bp
Strand : +
Note : -

DNA sequence : 
ATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGACAATATAAACGCGCTGA
TTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCAGACA
AATTATTAAGTAATGTGAAAAAAGAATATCCTTACCAAACACCTGTACTCGGTCGTTCTCAATCAGGTTGGGACAAAACT
GAAGGTAGCTACTCATCAACTGTTGCTGAAGATGGTGGCGTAGCGATTGTAAGTAAATATCCTATTAAAGAAAAAATCCA
GCATGTTTTCAAAAGCGGTTGTGGATTCGATAATGATAGCAACAAAGGCTTTGTTTATACAAAAATAGAGAAAAATGGTA
AGAACGTTCACGTTATCGGTACACATACACAATCTGAAGATTCACGTTGTGGTGCTGGAAATGATCGAAAAATTAGAGCT
GAACAAATGAAAGAAATCAGTGACTTTGTTAAAAAGAAAAATATCCCTAAAGATGAAACGGTATATATAGGTGGCGACCT
TAATGTTAATAAAGGCACTCCAGAGTTCAAAGATATGCTTAAAAACTTGAATGTAAATGATGTTCTATATGCAGGTCATA
ATAGCACATGGGACCCTCAATCAAATTCAATTGCGAAATATAATTACCCTAATGGTAAACCAGAACATTTAGACTATATA
TTTACAGATAAAGATCATAAACAACCAAAACAATTAGTCAATGAAGTTGTGACTGAAAAACCTAAGCCATGGGATGTATA
TGCGTTCCCATATTACTACGTTTACAATGATTTTTCAGATCATTACCCAATCAAAGCCTATAGTAAATAG

Protein sequence : 
MRDSKPNKYCCYKVSMYPNWGQYKRADLIGQSSYIKNNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQSGWDKT
EGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGCGFDNDSNKGFVYTKIEKNGKNVHVIGTHTQSEDSRCGAGNDRKIRA
EQMKEISDFVKKKNIPKDETVYIGGDLNVNKGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYI
FTDKDHKQPKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKAYSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
truncated-hlb NP_372527.1 hypothetical protein Not tested ¥ÕSa3 Protein 2e-131 100
hlb NP_646757.1 truncated beta-hemplysin Not tested ¥ÕSa3 Protein 2e-123 99
hlb NP_375112.1 hypothetical protein Not tested ¥ÕSa3 Protein 2e-131 99
unnamed CAA70683.2 sphingomyelinase-c Virulence LIPI-2 Protein 1e-68 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
truncated-hlb NP_372527.1 hypothetical protein VFG1798 Protein 2e-125 99
truncated-hlb NP_372527.1 hypothetical protein VFG0674 Protein 7e-69 56