Gene Information

Name : SSO0688 (SSO0688)
Accession : NP_342198.1
Strain : Sulfolobus solfataricus P2
Genome accession: NC_002754
Putative virulence/resistance : Resistance
Product : ABC transporter ATP binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 594271 - 595011 bp
Length : 741 bp
Strand : -
Note : Transport

DNA sequence :
TTGCCAAAAGATTTTTTAGAGGGAGCCAATAGAGTCGATTATATGACCGATATCTTAATCGATGCTATGGATTTAAAGAA
AGTATACAAAACTAAAAATATTGAATACGTTGCATTAAGAGGAGTAACTTTGAAAGTAAATAAAGGAGAATTCTTGGTTA
TTGCTGGTCCTTCTGGATCTGGCAAAACCACACTTTTAGATTTGCTAGGCCTTTTAGATTCACCTAGTGCTGGTAAAATA
ATAATAGATGGAATAGATGTTACGAATTTTGATGAAGATGAGAGAGCAATTTTTAGAAGAAGATATATAGGTTTTGTATT
TCAGTCATATAATTTAATTACGTATCTGACAGTTCTTGAGAACGTGGAATTAGCTTTAGCAGCTATAGGGATCCCCGTAT
GGAAAAGGAGGGAGAAAGCAGAAGAGATTCTGTCCATGATACCCGGTATGTTAGAACTTAAGAATAAAAAGCCTAATGAA
TTATCCGGAGGTCAACAACAGAGAGTTGCAATAGCTAGAGCCTTAGCCAATGATCCCAAGATATTGCTTGCAGACGAACC
GACTGCAAATCTAGATTCGAAAACAGGTGAGGCAATAGTGGAGTTAATGAAGAAGTTGAATGAAGAAAAAAAGGTAACTA
TTATAATGGCTACTCACGACCCAGATATGATGAGATATGCGGATAGGATCGTATATATTAGAGATGGATTAGTTGAAAAA
GAGGTGATACAGAATGAGTAA

Protein sequence :
MPKDFLEGANRVDYMTDILIDAMDLKKVYKTKNIEYVALRGVTLKVNKGEFLVIAGPSGSGKTTLLDLLGLLDSPSAGKI
IIDGIDVTNFDEDERAIFRRRYIGFVFQSYNLITYLTVLENVELALAAIGIPVWKRREKAEEILSMIPGMLELKNKKPNE
LSGGQQQRVAIARALANDPKILLADEPTANLDSKTGEAIVELMKKLNEEKKVTIIMATHDPDMMRYADRIVYIRDGLVEK
EVIQNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-25 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-25 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-25 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-22 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSO0688 NP_342198.1 ABC transporter ATP binding protein CP001581.1.gene598.p Protein 3e-31 47
SSO0688 NP_342198.1 ABC transporter ATP binding protein NC_012469.1.7686878. Protein 3e-36 47
SSO0688 NP_342198.1 ABC transporter ATP binding protein NC_008702.1.4606598. Protein 7e-30 44