Gene Information

Name : set9 (SA0385)
Accession : NP_373635.1
Strain : Staphylococcus aureus N315
Genome accession: NC_002745
Putative virulence/resistance : Virulence
Product : superantigen-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3889
EC number : -
Position : 444488 - 445366 bp
Length : 879 bp
Strand : +
Note : these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation

DNA sequence : 
ATGAAAATAACAACAATTGCTAAAACAAGTTTAGCACTAGGCCTTTTAACAACGGGTGTAATCACAACGACAACGCAAGA
AGCAAACGCGACAACACCATCTTCCACTAAAGTGGAAGCACCACAATCAACACCGCCCTCAACTAAAGTAGAAGCACCGC
AATCAAAACCAAACGCGACAACACCGCCTTCAACTAAAGTGGAAACACCGCAACAAACACCGAACGCGACAACACCATCT
TCAACTAAAGTGGAAACACCACAATCGCCAACCACAAAACAAGTACCAACAGAAATAAATCCTAAATTTAAAGATTTAAG
AGCGTATTATACGAAACCAAGTTTAGAATTTAAAAATGAGATTGGTATTATTTTAAAAAAATGGACGACAATAAGATTTA
TGAATATTGTTCCAGATTATTTCATATATAAAATAGCTTTAGTTGGAAAAGACGATAAAAAATATGATGAAGGAGTACAT
AGGAATGTCGATGTATTTGTCGTTTTAGAAGAAAAAAATAAATATGGAGTGGAAAGATACTCGGTCGGTGGTATCACAAA
GAGTAATAGTAAAAAAGTTGATCACAAAGCAGGAGTAAGAATTACTAAAGAAGATAATAAAGGTACAATCTCTCATGATG
TTTCAGAATTCAAGATTACTAAAGAGCAGATTTCCTTGAAAGAACTTGATTTTAAATTGAGAAAACAACTTATTGAAAAT
CATAATCTGTACGGTAACGTTGGTTCAGGTAAAATTGTTATTAACATGAAAAACGGTGGAAAGTACACGTTTGAATTACA
CAAAAAATTACAAGAAAATCGCATGGCAGACGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAA

Protein sequence : 
MKITTIAKTSLALGLLTTGVITTTTQEANATTPSSTKVEAPQSTPPSTKVEAPQSKPNATTPPSTKVETPQQTPNATTPS
STKVETPQSPTTKQVPTEINPKFKDLRAYYTKPSLEFKNEIGIILKKWTTIRFMNIVPDYFIYKIALVGKDDKKYDEGVH
RNVDVFVVLEEKNKYGVERYSVGGITKSNSKKVDHKAGVRITKEDNKGTISHDVSEFKITKEQISLKELDFKLRKQLIEN
HNLYGNVGSGKIVINMKNGGKYTFELHKKLQENRMADVIDGTNIDNIEVNIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
set9 NP_373635.1 superantigen-like protein Virulence vSa¥á Protein 1e-121 100
set4nm YP_001331425.1 superantigen-like protein Virulence vSa¥á Protein 7e-112 90
SAUSA300_0398 YP_493112.1 superantigen-like protein Virulence vSa¥á Protein 7e-112 90
SAS0387 YP_042512.1 superantigen-like protein Virulence vSa¥á Protein 1e-110 90
set19 NP_645202.1 superantigen-like protein Virulence vSa¥á Protein 1e-110 90
SAKOR_00408 YP_008490592.1 Exotoxin Virulence vSa¥á Protein 7e-112 89
SACOL0472 YP_185362.1 superantigen-like protein Virulence vSa¥á Protein 6e-110 88
SAR0424 YP_039876.1 superantigen-like protein Virulence vSa¥á Protein 2e-95 74
SAR0425 YP_039877.1 superantigen-like protein Not tested vSa¥á Protein 7e-83 70
SAMSHR1132_03740 YP_005324896.1 exotoxin Virulence vSa¥á Protein 2e-79 68
SAMSHR1132_03730 YP_005324895.1 exotoxin Virulence vSa¥á Protein 4e-48 50
SAKOR_00405 YP_008490589.1 Exotoxin Virulence vSa¥á Protein 2e-43 49
set7 NP_373633.1 superantigen-like protein Virulence vSa¥á Protein 8e-43 48
set7 NP_370947.1 superantigen-like protein Virulence vSa¥á Protein 7e-43 48
SAS0385 YP_042510.1 superantigen-like protein Virulence vSa¥á Protein 5e-43 48
set17 NP_645200.1 superantigen-like protein Virulence vSa¥á Protein 5e-43 48
SACOL0469 YP_185359.1 superantigen-like protein Virulence vSa¥á Protein 4e-43 48
set2nm YP_001331423.1 superantigen-like protein Virulence vSa¥á Protein 4e-43 48
set7 YP_493110.1 superantigen-like protein Virulence vSa¥á Protein 4e-43 48
SAR0423 YP_039875.1 superantigen-like protein Virulence vSa¥á Protein 6e-43 45
set6nm YP_001331427.1 superantigen-like protein Virulence vSa¥á Protein 7e-34 44
SAUSA300_0400 YP_493114.1 superantigen-like protein Virulence vSa¥á Protein 7e-34 44
SACOL0478 YP_185368.1 superantigen-like protein Virulence vSa¥á Protein 6e-29 43
set11nm YP_001331434.1 superantigen-like protein Virulence vSa¥á Protein 6e-29 43
SAUSA300_0407 YP_493121.1 superantigen-like protein Virulence vSa¥á Protein 6e-29 43
SAS0389 YP_042514.1 superantigen-like protein Virulence vSa¥á Protein 8e-32 41
set21 NP_645204.1 superantigen-like protein Virulence vSa¥á Protein 8e-32 41