|
Name : CC_3620 (CC_3620) Accession : NP_422414.1 Strain : Caulobacter crescentus CB15 Genome accession: NC_002696 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 3878194 - 3880155 bp Length : 1962 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGCCCGTTTCGCCCATCAAGATGGCCGACGCGATCCGCGTCCTCTCCATGGACGCCGTGCACAAGGCGAAGTCCGGCCA CCAGGGCATGCCGATGGGCATGGCCGACGTGGCGACGGTCCTATGGGGCAAGTTCCTGAAATTCGACGCGTCTAAGCCTG ACTGGGCCGACCGCGACCGCTTCGTGCTGTCGGCCGGTCACGGCTCGATGCTGCTCTATTCCCTGCTGCATCTGACCGGC TTCAAGGCCATGACGATGAAGGAGATCGAGAACTTCCGTCAGTGGGGGGCGCTGACCCCGGGCCACCCGGAAGTGCATCA CACGCCCGGCGTCGAGACCACGACCGGTCCGCTGGGCCAGGGCCTGGCCACCGCCGTCGGCATGGCCATGGCCGAGGCGC ACCTGGCCGCCCGCTACGGCTCTGACCTCGTCGACCACCGCACCTGGGTGATCGCCGGCGACGGATGCCTGATGGAGGGC GTCAGCCATGAGGCGATCAGCATCGCCGGCCGCCTGAAGCTCTCGAAGCTGACGGTCCTCTTCGACGACAACAACACCAC CATCGACGGGGTGGCCACCATCGCCGAGACCGGCGACCAGGTCGCGCGCTTCAAGGCCGCCGGCTGGGCGGTCAAGGTCG TCGACGGCCACGACCACGGCAAGATCGCTGCGGCCCTGCGCTGGGCCACCAAGCAGGACCGCCCGACCATGATCGCGTGC AAGACGCTGATCTCGAAGGGCGCGGGCCCCAAGGAAGGCGACCCCCACAGCCACGGCTACACCCTGTTCGACAACGAGAT CGCCGCCTCGCGCGTGGCCATGGGCTGGGACGCTGCGCCCTTCACCGTGCCCGACGACATCGCCAAGGCCTGGAAGAGCG TCGGCCGTCGCGGCGCCAAGGTCCGCAAGGCCTGGGAGGCCAAGCTGGCCGCCTCGCCCAAGGGGGCCGACTTCACCCGC GCCATGAAGGGCGAGCTGCCGGCGAACGCCTTCGAGGCGCTGGACGCCCACATCGCCAAGGCCCTGGAGACCAAGCCGGT CAACGCCACCCGCGTCCACTCCGGCTCGGCCCTGGAGCACCTGATCCCGGCGATCCCCGAGATGATCGGCGGCTCGGCCG ACCTGACCGGCTCGAACAACACCCTGGTCAAGGGCATGGGCGCGTTCGACGCGCCCGGCTACGAAGGCCGCTATGTCCAC TATGGCGTGCGTGAGTTCGGCATGGCCGCGGCCATGAACGGCATGGCCCTGCACGGCGGGATCATCCCCTATTCGGGCAC CTTCCTGGCCTTCGCCGACTACAGCCGCGCGGCCATCCGCCTGGGCGCCCTGATGGAGGCCCGCGTCGTCCACGTGATGA CCCACGACTCCATCGGTCTCGGCGAAGACGGTCCCACCCACCAGCCGGTCGAGCACGTTGCCAGCTTGCGCGCCATTCCG AACCTGCTGGTCTTCCGTCCGGCCGATGCCGTCGAGGCCGCCGAGTGCTGGAAGGCGGCCCTGCAACATCAACGCACGCC GTCGGTGATGACCCTGTCGCGCCAGAAGACCCCGCACGTCCGCACCCAGGGCGGCGACTTGTCGGCCAAGGGCGCCTACG AGCTGCTGGCGGCCGAGGGCGGCGAGGCGCAGGTGACGATCTTCGCCTCGGGCACCGAGGTCGGCGTCGCCGTCGCCGCG CGCGACATCCTGCAGGCCAAGGGCAAGCCGACCCGCGTGGTCTCCACGCCCTGCTGGGAGCTGTTCGATCAGCAGCCCGC CGCCTACCAGGCCGCCGTCATCGGCAAGGCCCCGGTGCGCGTCGCCGTCGAAGCGGGCGTCAAGATGGGCTGGGAGCGCT TCATTGGCGAGAACGGCAAGTTCATCGGCATGAAGGGCTTCGGCGCCTCGGCTCCGTTCGAGCGCCTGTATAAAGAGTTC GGCATCACCGCTGAAGCCGTGGCCGAAGCGGCTCTGGCCTGA Protein sequence : MPVSPIKMADAIRVLSMDAVHKAKSGHQGMPMGMADVATVLWGKFLKFDASKPDWADRDRFVLSAGHGSMLLYSLLHLTG FKAMTMKEIENFRQWGALTPGHPEVHHTPGVETTTGPLGQGLATAVGMAMAEAHLAARYGSDLVDHRTWVIAGDGCLMEG VSHEAISIAGRLKLSKLTVLFDDNNTTIDGVATIAETGDQVARFKAAGWAVKVVDGHDHGKIAAALRWATKQDRPTMIAC KTLISKGAGPKEGDPHSHGYTLFDNEIAASRVAMGWDAAPFTVPDDIAKAWKSVGRRGAKVRKAWEAKLAASPKGADFTR AMKGELPANAFEALDAHIAKALETKPVNATRVHSGSALEHLIPAIPEMIGGSADLTGSNNTLVKGMGAFDAPGYEGRYVH YGVREFGMAAAMNGMALHGGIIPYSGTFLAFADYSRAAIRLGALMEARVVHVMTHDSIGLGEDGPTHQPVEHVASLRAIP NLLVFRPADAVEAAECWKAALQHQRTPSVMTLSRQKTPHVRTQGGDLSAKGAYELLAAEGGEAQVTIFASGTEVGVAVAA RDILQAKGKPTRVVSTPCWELFDQQPAAYQAAVIGKAPVRVAVEAGVKMGWERFIGENGKFIGMKGFGASAPFERLYKEF GITAEAVAEAALA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 3e-132 | 48 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 7e-133 | 47 |
