Gene Information

Name : CC_3580 (CC_3580)
Accession : NP_422374.1
Strain : Caulobacter crescentus CB15
Genome accession: NC_002696
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3835116 - 3836636 bp
Length : 1521 bp
Strand : +
Note : identified by match to protein family HMM

DNA sequence :
ATGACCAAGCCCGAATTCATCGAGTCCCTGTCGCGCCCGCCGTTCAAGGCCCGCTACGACAACTTCATCGGCGGCCAGTG
GGTCGCCCCGGCCGACGGCCGCTACTTCGACAACAGCTCGCCGATCCACGGCCGGAAGATCTGCGAGATCGCGCGTTCGC
AGGCGATCGACATCGAGCGCGCGCTCGACGCCGCCCACGCCGCCAAGGCCGGCTGGGCGAGGACCAGCGCCGCCGACCGC
TCGCGCATCCTGCTGCGCATCGCCGACCGCATGGAGGAGAACCTCGCGGCCCTGGCCACCGCCGAGACCTGGGACAACGG
CAAGCCGATCCGCGAGACCCTGGCCGCCGACATTCCCCTGGCCATCGACCACTTCAGATACTTCGCCGGCTGCCTGCGCA
GCCAGGAAGGCTCGATCTCCGAGATCGACCACGACACCATCGCCTATCACTTCCACGAGCCGTTGGGCGTGGTCGGCCAG
ATCATTCCCTGGAATTTCCCGCTCCTGATGGCCTGCTGGAAGCTGGCCCCGGCCCTGGCCGCCGGCAACTGCGTGGTGCT
GAAACCCGCCGAGCAGACCCCGGCCTCGATCATGGTCTGGGCCGAGATGATCGGCGACCTGCTGCCCGCCGGCGTGCTCA
ACATCGTCAACGGCTTCGGCCTTGAGGCCGGCAAGCCGCTGGCCTCCAGCCCGCGCATCGCCAAGATCGCCTTCACCGGC
GAGACCTCGACCGGTCGGCTGATCATGCAGTACGCCGCCCAGAACCTGATCCCCGTGACCCTGGAGCTGGGCGGCAAGTC
CCCGAACATCTTCTTCGACGACGTGGCGCGCGAGGACGACGACTATCTCGACAAGGCCCTGGAGGGCTTCACCATGTTCG
CCCTGAACCAGGGCGAGGTCTGCACCTGTCCCAGCCGCGCGCTGGTGCAGGAGTCGATCTATGAGAAGTTCATGGAGCGC
GCCCTCAAGCGGGTGAACGCCGTGGTCCAGGGCAGCCCGCTCGATCCCGCCACCATGATCGGCGCCCAGGCGTCCGAAGA
GCAGCTGAACAAGATCCTCGGCTACATGGACATCGGCCGCAACGAGGGCGCCAAGCTGCTGGCGGGCGGCCAGCGCAAGA
TCCTGCCGGGCCAGCTGGCCGACGGCTACTATGTCGAGCCGACGGTCTTCGAAGGCCACAACAAGATGCGGATCTTCCAG
GAGGAGATCTTCGGTCCGGTCCTGGCGGTGACAACCTTCAAGACCGAGGAAGAAGCCCTGGAGATCGCCAACGACACCGC
CTTCGGTCTGGGCGCGGGCGTCTGGAGCCGCGACGCCAACCGTTGCTACCGCTTCGGGCGCGGCATCGAGGCCGGCCGGG
TCTGGACCAACTGCTACCATGCCTATCCGGCCCACGCGGCGTTTGGCGGCTACAAGCAGTCGGGCGTCGGGCGTGAGACC
CACAAGATGATGCTGGACCACTATCAGCAGACCAAGAACATGCTGGTCAGCTACAGCCCCAAGGCGCTCGGCTTCTTCTG
A

Protein sequence :
MTKPEFIESLSRPPFKARYDNFIGGQWVAPADGRYFDNSSPIHGRKICEIARSQAIDIERALDAAHAAKAGWARTSAADR
SRILLRIADRMEENLAALATAETWDNGKPIRETLAADIPLAIDHFRYFAGCLRSQEGSISEIDHDTIAYHFHEPLGVVGQ
IIPWNFPLLMACWKLAPALAAGNCVVLKPAEQTPASIMVWAEMIGDLLPAGVLNIVNGFGLEAGKPLASSPRIAKIAFTG
ETSTGRLIMQYAAQNLIPVTLELGGKSPNIFFDDVAREDDDYLDKALEGFTMFALNQGEVCTCPSRALVQESIYEKFMER
ALKRVNAVVQGSPLDPATMIGAQASEEQLNKILGYMDIGRNEGAKLLAGGQRKILPGQLADGYYVEPTVFEGHNKMRIFQ
EEIFGPVLAVTTFKTEEEALEIANDTAFGLGAGVWSRDANRCYRFGRGIEAGRVWTNCYHAYPAHAAFGGYKQSGVGRET
HKMMLDHYQQTKNMLVSYSPKALGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-147 65
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-153 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-153 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-153 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-152 65
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 5e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CC_3580 NP_422374.1 aldehyde dehydrogenase VFG0082 Protein 3e-147 65