Gene Information

Name : CC_3141 (CC_3141)
Accession : NP_421935.1
Strain : Caulobacter crescentus CB15
Genome accession: NC_002696
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3382734 - 3384224 bp
Length : 1491 bp
Strand : -
Note : identified by match to protein family HMM

DNA sequence :
GTGACCCTTCCCGCCGACATGACCGAGCGCCTCGCCAAGCTTGCGCCGCCCAGCCAGGCGGTGATCGACGGCGACTTGGT
CGAAGCGGCGTCGGGCGCGACCTTCCATAATGTCTCGCCGCGTGACGGCCAGGTGCTGAACCTGGTCACGGCCTGCCAAG
CCGACGACGTCGAGCGCGCGGTCGCCGGCGCGCGCGCCGCGTTCGAGGACGGCCGCTGGCGCGATCAGGGGCCGCGCCAG
AAGAAGGCGGTGCTGTTCCGTCTGGCCGAACTGATGGAACGCGACGCCGACGAGCTGGCGCTGCTGGAAAGCCTGGATGT
GGGCAAGCCGATCAGCGACGCGCGCAACGTCGACATCCCGCTCGCGATCAACACCTGCCGCTGGTACGCCGAGGCGCTGG
ACAAGGTTTATGGCGAGGTCGGGACCTCGCCCGCTGATCGGCTGAGCTATGCGGTCCATGAACCGCTGGGCGTGATCGGC
GCCATCGTGCCGTGGAACTTCCCGCTGCACATGGCGATGTGGAAGGTGGCGCCCGCCCTGGCCATGGGCAATTCGGTCGT
GCTGAAACCCGCCGAGCAGTCGCCGCTGACCGCGCTGAAGCTTGGGGCGCTGGCGCTGGAGGCGGGGTTGCCGCCAGGCG
TGCTGAACGTCATTCCGGGGCTGGGCGGCGTGGCCGGCGAGGCGCTGGCCCTGTCGATGGACGTCGATATGATCGCCTTC
ACCGGTTCTGGGCCCGTGGGGCGCCGGCTGATGGAGTATTCGGCGCGTTCGAACCTCAAGCGCGTGTCCCTGGAGTTGGG
CGGCAAGTCGCCTCAGATCGTCTTCGCCGACTGTCCGGACCTAGAGGCCGCCGCCCAGGCCGCCGCCTGGGGCGTGTTCT
ATAACCAGGGCGAGGTCTGCACCGCCGCCTCGCGCCTGCTGGTCGAGGCCCCGATCAAGGACGCTTTCCTGGCGCGGGTG
ATCGAGGTCGCCAAGGGCATGAAGGTCGGTGATCCGCTGGATCCGTCGACCCAGTTCGGGGCCATGGTCAGCGAGCGGCA
GATGAACACCGCGCTCGACTATATCGCCACCGCCGACAGCCAGGGCGCGCGGCGCGTGCTGGGCGGTCAGAGGGTGCGCC
AGGAGGCCGGCGGTTTCTATGTCGAGCCGACGATCTTCGACCAGGTGCGGCCCGACCAGACCCTGGCGCGGGAAGAGGTG
TTCGGCCCCGTGCTGGGCGTGATGACCTTCTCGTCCGAAGACGAGGCGATGCGGCTGGCCAATGACACGGTCTATGGCCT
GGCTGCAGGTCTGTGGACGGCCGACGTCAGCAAGGCTCTGCGCGGCGCACGGCGTTTGAAAGCAGGGCTCGTCTGGGTCA
ACGGCTGGGACGCCTGCGACATCACCATGCCGTTCGGAGGCTTCAAGCAGTCGGGTTTTGGCCGCGACCGCAGCCTTCAT
GCGTTGCACAAGTACGCCGACCTGAAGTCGGTGTCCGTGACGCTGAGGTGA

Protein sequence :
MTLPADMTERLAKLAPPSQAVIDGDLVEAASGATFHNVSPRDGQVLNLVTACQADDVERAVAGARAAFEDGRWRDQGPRQ
KKAVLFRLAELMERDADELALLESLDVGKPISDARNVDIPLAINTCRWYAEALDKVYGEVGTSPADRLSYAVHEPLGVIG
AIVPWNFPLHMAMWKVAPALAMGNSVVLKPAEQSPLTALKLGALALEAGLPPGVLNVIPGLGGVAGEALALSMDVDMIAF
TGSGPVGRRLMEYSARSNLKRVSLELGGKSPQIVFADCPDLEAAAQAAAWGVFYNQGEVCTAASRLLVEAPIKDAFLARV
IEVAKGMKVGDPLDPSTQFGAMVSERQMNTALDYIATADSQGARRVLGGQRVRQEAGGFYVEPTIFDQVRPDQTLAREEV
FGPVLGVMTFSSEDEAMRLANDTVYGLAAGLWTADVSKALRGARRLKAGLVWVNGWDACDITMPFGGFKQSGFGRDRSLH
ALHKYADLKSVSVTLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 4e-92 55
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-66 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-66 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-66 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-66 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CC_3141 NP_421935.1 aldehyde dehydrogenase VFG0082 Protein 1e-66 41