Gene Information

Name : CC_2766 (CC_2766)
Accession : NP_421562.1
Strain : Caulobacter crescentus CB15
Genome accession: NC_002696
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2982457 - 2983134 bp
Length : 678 bp
Strand : -
Note : identified by match to protein family HMM

DNA sequence : 
ATGCGCATCCTGCTCGTCGAGGACGATCCCGACCTGACGCGTCAGCTGAAGCTGGCCCTGGCCGACGCCGGCTATGCCGT
CGACCACGCGCCCGATGGCGAGGAAGCCCAGTATCTGGGCGAGAACGAGCCCTATGACGCGGTGATCCTGGACCTTGGCC
TGCCCAAGGTGGACGGCGTGTCGGTGCTGGAGCGCTGGCGGCGCGGCAATGTCACCACGCCCGTGCTGATCCTGACCGCG
CGCGGCGCCTGGAGCGACAAGGTCGCCGGCTTCGACGCGGGCGCCGACGACTATCTGGCCAAGCCGTTCCATACCGAGGA
GCTTCTGGCCCGCCTGCGCGCCCTGCTGCGCCGCTCGGCCGGTCACGCCGCGCCGTCGCTGTCGTGCGGGGCCCTGCGCC
TCGATCCGCGCGCCGCCCGCGCCAGCGTCAATGGCGAGCCGCTGCGCCTGACCTCGCTGGAATACCGCCTGCTGCACTAC
ATGATCATGCACCAGGGCCGGGTGATCGGCCGCACCGAGCTGGTCGAGCACCTGTACGACCAGGACTTCGACCGCGACAG
CAACACCATCGAGGTGTTCATCGGGCGCCTCCGCAAGAAGCTGGGCGCGGACCGGATCGAGACCGTGCGGGGCCTGGGCT
ATCGCCTCGCGGCGCTGCCGGGCGAAGACGCGGCGTGA

Protein sequence : 
MRILLVEDDPDLTRQLKLALADAGYAVDHAPDGEEAQYLGENEPYDAVILDLGLPKVDGVSVLERWRRGNVTTPVLILTA
RGAWSDKVAGFDAGADDYLAKPFHTEELLARLRALLRRSAGHAAPSLSCGALRLDPRAARASVNGEPLRLTSLEYRLLHY
MIMHQGRVIGRTELVEHLYDQDFDRDSNTIEVFIGRLRKKLGADRIETVRGLGYRLAALPGEDAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-27 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CC_2766 NP_421562.1 DNA-binding response regulator CP000647.1.gene1136. Protein 7e-37 48
CC_2766 NP_421562.1 DNA-binding response regulator BAC0530 Protein 6e-37 48
CC_2766 NP_421562.1 DNA-binding response regulator CP001918.1.gene2526. Protein 4e-36 47
CC_2766 NP_421562.1 DNA-binding response regulator CP001138.1.gene1939. Protein 4e-37 47
CC_2766 NP_421562.1 DNA-binding response regulator NC_002516.2.879194.p Protein 1e-35 47
CC_2766 NP_421562.1 DNA-binding response regulator CP000034.1.gene2022. Protein 1e-36 46
CC_2766 NP_421562.1 DNA-binding response regulator NC_002695.1.913289.p Protein 4e-36 46
CC_2766 NP_421562.1 DNA-binding response regulator BAC0487 Protein 4e-28 45
CC_2766 NP_421562.1 DNA-binding response regulator CP004022.1.gene1005. Protein 3e-38 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CC_2766 NP_421562.1 DNA-binding response regulator VFG0475 Protein 4e-37 47
CC_2766 NP_421562.1 DNA-binding response regulator VFG0473 Protein 3e-29 45
CC_2766 NP_421562.1 DNA-binding response regulator VFG1390 Protein 8e-24 42