|
Name : CC_1428 (CC_1428) Accession : NP_420241.1 Strain : Caulobacter crescentus CB15 Genome accession: NC_002696 Putative virulence/resistance : Unknown Product : deoxyribodipyrimidine photolyase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0415 EC number : - Position : 1578599 - 1580050 bp Length : 1452 bp Strand : - Note : identified by match to protein family HMM DNA sequence : GTGCAAGTGCGGAACGACTCTGGCGACAGCAAGGCGAACTTAGACGCCGTCATCGTGTGGTTTCGCAAGGATCTGCGCAT AGCCGACAATCCGGCCCTGCGCCATGCTGCGCAAAGCGGTCGCCCCGTGATCCCGCTCTACATTCTGGACGAAACACCCG GCATTCGGCCTATGGGCGGCGCCTCGCTGTGGTGGCTCGACAAGTCGCTCAAGAGCCTGGCCGCCAGCCTTGAGACACTC GGGACCAAGCTCGTCCTTCGCAAGGGCGTCGCCGCCGAGGTGCTTGACCAGCTCATCGCGCAGTCGGGCGCGCGCAGCGT GGTCTGGAACCGCCTCTACGATAAGCCGTCGACCGATCGCGACGCGGCGATCAAGGCCGCGCTCAGGGATCGCGGCGTCG ACTGCCAGAGCTTCAACGCCGGGCTCCTGAACGAGCCCTGGACCGTCAAGAACGGCTCGGACCAGCCCTACAAGGTCTTC ACCCCCTACTGGCGCGCCGCCCGTGAACACCTGACCGACGTCGCGGTCACGGCGGCGCCCGGTCATCTTGTAGCGCCGGC TCGTTTCCCAGCCAGCGAAAGCCTGGCCAGCTGGAACCTGCATCCGACGAAGCCGGACTGGTCCAAGGGCTTCGACCTCT GGACGCCCGGCGAGGCCGGCGCTCATGCGCGGCTTGACGCGTTCCTGAAAGGACCGATCAAGGGCTATGGCGACCAGCGC GACATCCCGGGCGTCGAAGCGACGTCGAAGCTGTCGCCCCACCTGCATTTCGGCGAGATCGGCCCACGACAGGTCTGGTT GGCGACCCGCAGCGCCGCCGACCAGGGCGACATCCCGCTCGCCGAGGCCGACAAGTTCCTGTCGGAGATTGGCTGGCGCG AATTCAACCATTCGATCCTGTACAACTGGCCGCACATGCCCAGCGCAAACTTCAAGCCGGAGTTCGATGGCTTTCCTTGG GTGAAGGACGAGGGCGCGCTGGAGGCCTGGAAGAGGGGCCAGACCGGCTATCCGATCGTCGACGCCGGAATGCGCGAGCT TTGGACCACCGGCTTCATGCACAATCGGGTGCGCATGATCGTCGCGTCGTTTCTGATCAAGCACCTGATGATCGACTGGC GCGAGGGCGAGGCCTGGTTCTGGGACACGCTTCTGGACGCCGATCTCGCCAACAATGTCGGCAACTGGCAGTGGACGGCG GGCAGCGGCGCCGACGCCGCGCCCTACTTCCGGATCTTCAATCCGATCGCCCAGGGCGAGAAGTTCGACCCCAAGGGCGA CTATGTCCGGCGTTGGGTTCCGGAACTTCGCAACGTTTCAGACGATGTTATCCACAAGCCGTGGACCAAACCCCTGCATC TGCCGGCGGGCGCCAAACGTCTCTATAGCCGACCGATCGTCGACCACGCCATGGCGCGGGCGCGGGCGCTGGAGGCCTAT CATGGCCTCTAG Protein sequence : MQVRNDSGDSKANLDAVIVWFRKDLRIADNPALRHAAQSGRPVIPLYILDETPGIRPMGGASLWWLDKSLKSLAASLETL GTKLVLRKGVAAEVLDQLIAQSGARSVVWNRLYDKPSTDRDAAIKAALRDRGVDCQSFNAGLLNEPWTVKNGSDQPYKVF TPYWRAAREHLTDVAVTAAPGHLVAPARFPASESLASWNLHPTKPDWSKGFDLWTPGEAGAHARLDAFLKGPIKGYGDQR DIPGVEATSKLSPHLHFGEIGPRQVWLATRSAADQGDIPLAEADKFLSEIGWREFNHSILYNWPHMPSANFKPEFDGFPW VKDEGALEAWKRGQTGYPIVDAGMRELWTTGFMHNRVRMIVASFLIKHLMIDWREGEAWFWDTLLDADLANNVGNWQWTA GSGADAAPYFRIFNPIAQGEKFDPKGDYVRRWVPELRNVSDDVIHKPWTKPLHLPAGAKRLYSRPIVDHAMARARALEAY HGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| DIP0113 | NP_938509.1 | riboflavin biosynthesis protein | Not tested | Not named | Protein | 4e-66 | 42 |
| CD241_0111 | YP_005124380.1 | putative riboflavin biosynthesis protein | Not tested | Not named | Protein | 2e-66 | 42 |
