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Name : ECs4574 (ECs4574) Accession : NP_312601.1 Strain : Escherichia coli Sakai Genome accession: NC_002695 Putative virulence/resistance : Virulence Product : SepD Function : - COG functional category : - COG ID : - EC number : - Position : 4610921 - 4611376 bp Length : 456 bp Strand : + Note : similar to SepD (L0040) [Escherichia coli O157:H7 strain EDL933] gi|3414908|gb|AAC31519.1|, SepD proteins e.g. [Escherichia coli strain E2348/69] gi|886476|emb|CAA90273.1|; type III secretion system protein DNA sequence : ATGAACAATAATAATGGCATAGCAAAGAATGATTGTGACTGGCTAACGGCCCTTGATTTTGTAAAGGATGTCAACGGTTC ACCAACGCATCTCACTTTTTATATCTACCAAAAAAATGCTTTCTTGCACGATTTTGGAAACTACTGGGTTCTATATATTG AGCTTAGTGGTGATTTTCGTCAGGTTCCAACAGATACATTTATCAGACTCTGCAATATCCTGGCCGTTAGTAACGAATAT AAACAAATGGGTATTTTCCTGTCTAATAAGAAGTGGTATCTTTGCCAAATTTTTCATAAAGATAATAATCATCGCGCAAA CATGTCAAAAGCAATAATGCAACATACTCTCGCCTCTTTGCTCGATAAGCAATTTGATAAACTAGAGCAATTATCTTCAT CGGATACAATGATGCCGCCAACACACTTGTTTTCTGATATAGGACGAATTGTGTAA Protein sequence : MNNNNGIAKNDCDWLTALDFVKDVNGSPTHLTFYIYQKNAFLHDFGNYWVLYIELSGDFRQVPTDTFIRLCNILAVSNEY KQMGIFLSNKKWYLCQIFHKDNNHRANMSKAIMQHTLASLLDKQFDKLEQLSSSDTMMPPTHLFSDIGRIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sepD | ACU09464.1 | SepD protein | Virulence | LEE | Protein | 2e-67 | 100 |
| Z5125 | NP_290274.1 | hypothetical protein | Not tested | LEE | Protein | 2e-67 | 100 |
| ECs4574 | NP_312601.1 | SepD | Virulence | LEE | Protein | 2e-67 | 100 |
| unnamed | AAC31519.1 | L0040 | Not tested | LEE | Protein | 2e-67 | 100 |
| sepD | YP_003236094.1 | secretion switching protein SepD | Virulence | LEE | Protein | 2e-66 | 99 |
| unnamed | AAC38378.1 | rOrf6 | Not tested | LEE | Protein | 2e-66 | 99 |
| unnamed | AAK26709.1 | unknown | Not tested | LEE | Protein | 3e-62 | 91 |
| sepD | YP_003223481.1 | secretion switching protein SepD | Not tested | LEE | Protein | 4e-62 | 91 |
| sepD | AAL57536.1 | SepD | Virulence | LEE | Protein | 3e-62 | 91 |
| sepD | YP_003232147.1 | secretion switching protein SepD | Not tested | LEE | Protein | 4e-62 | 91 |
| st18 | CAC81856.1 | ST18 protein | Not tested | LEE II | Protein | 3e-62 | 91 |
| sepD | CAI43880.1 | SepD protein | Virulence | LEE | Protein | 3e-62 | 91 |
| unnamed | AAL06363.1 | SepD | Virulence | LEE | Protein | 2e-61 | 88 |
| sepD | AFO66409.1 | putative LEE-encoded type III secretion system component | Virulence | SESS LEE | Protein | 1e-43 | 59 |
| sepD | AFO66325.1 | putative LEE-encoded type III secretion system component | Virulence | SESS LEE | Protein | 1e-43 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECs4574 | NP_312601.1 | SepD | VFG0818 | Protein | 7e-68 | 100 |
| ECs4574 | NP_312601.1 | SepD | VFG0724 | Protein | 6e-67 | 99 |
