Gene Information

Name : ECs4570 (ECs4570)
Accession : NP_312597.1
Strain : Escherichia coli Sakai
Genome accession: NC_002695
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4609042 - 4609395 bp
Length : 354 bp
Strand : -
Note : similar to Orf12 [Escherichia coli strain E2348/69] gi|2865288|gb|AAC38381.1|, L0036 [Escherichia coli O157:H7 strain EDL933] gi|3414904|gb|AAC31515.1|

DNA sequence :
ATGAATCTTTTAGTTAAAAGAAACGTTGAAGAGTTTTTAAGATTATTGGGAAATGATTTTTATTTATTTGATAACCGTGT
TGAAATTGATTTTAATGGGTTTTCTTTTTTTATTGAAATAATTGATAATAATGTTTTTGTTACGTTTGCTTTAGAGTATA
ACGAAAACGCATTTTTCTCTTTCTTTAGTGCCCTTGCTCCTGAGCGTACGCAGGGAGTGATTGAACATATTTTTGTCTAC
GATAATAAATTGTGCTTAAGTTGTTTGTTAACCAATATCGATGTTTTTTTTCTAATGAATACTTTTCAACAGCATGTGCA
GATTATTGAGCGCGTTCGCAGGATGACATCATGA

Protein sequence :
MNLLVKRNVEEFLRLLGNDFYLFDNRVEIDFNGFSFFIEIIDNNVFVTFALEYNENAFFSFFSALAPERTQGVIEHIFVY
DNKLCLSCLLTNIDVFFLMNTFQQHVQIIERVRRMTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mpc YP_003236090.1 regulator Mpc Not tested LEE Protein 2e-48 100
Z5121 NP_290270.1 hypothetical protein Not tested LEE Protein 2e-48 100
unnamed AAC38381.1 Orf12 Not tested LEE Protein 2e-48 100
ECs4570 NP_312597.1 hypothetical protein Not tested LEE Protein 2e-48 100
unnamed AAC31515.1 L0036 Not tested LEE Protein 2e-48 100
unnamed ACU09460.1 ST22 protein Virulence LEE Protein 2e-48 100
mpc YP_003223477.1 regulator Mpc Not tested LEE Protein 4e-47 96
unnamed AAK26713.1 unknown Not tested LEE Protein 3e-47 96
mpc YP_003232151.1 regulator Mpc Not tested LEE Protein 4e-47 96
unnamed AAL57540.1 unknown Not tested LEE Protein 3e-47 96
unnamed CAI43876.1 hypothetical protein Not tested LEE Protein 3e-47 96
st22 CAC81860.1 ST22 protein Not tested LEE II Protein 6e-47 95
unnamed AAL06367.1 unknown Not tested LEE Protein 8e-44 92
SESS1296_03646 AFO66335.1 putative LEE-encoded putative type III secretion system factor Virulence SESS LEE Protein 5e-27 48
SESS1635_03859 AFO66413.1 putative LEE-encoded putative type III secretion system factor Virulence SESS LEE Protein 5e-27 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECs4570 NP_312597.1 hypothetical protein VFG0728 Protein 7e-49 100
ECs4570 NP_312597.1 hypothetical protein VFG0814 Protein 7e-49 100