Gene Information

Name : ECs4566 (ECs4566)
Accession : NP_312593.1
Strain : Escherichia coli Sakai
Genome accession: NC_002695
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4604905 - 4605321 bp
Length : 417 bp
Strand : -
Note : similar to Orf16 [Escherichia coli strain E2348/69] gi|2865292|gb|AAC38385.1|, L0032 [Escherichia coli O157:H7 strain EDL933] gi|3414900|gb|AAC31511.1|

DNA sequence : 
TTGACTAGAGTTTCTCTAAAAAGAAATTTGATAGAGCCTGTTTCTTTTCGGCCATCAGATGATTGGCCGCAAGGAGAAGA
AAGTTTTAATGATATTTTTTATCATATAAAAAAAAGATCGCCTGATACGTTGTTCATACGAATGGCTTCTTTATGGAAGA
GATTGTTTTACTCCTCGGGCCGAAGACGACGCTACTTTGAAGAAGGGGAGCACTCGTTTAGTATTCTTTGTGGAAGATTA
CGAGGAATTGTTTTAACAATTAAATGTAGTAACGGAATCATTTATCTGTCTATTAAAGTAAGCCCAAATAATAGAAATCA
TGTTTTTTTATATCATAAAAAAGACTATGTTTTCGATAAGTTAAAAGAAATCTTTCCTGATGAAGCCATTGAGTTCACAA
TTGAATATGAAAATTAA

Protein sequence : 
MTRVSLKRNLIEPVSFRPSDDWPQGEESFNDIFYHIKKRSPDTLFIRMASLWKRLFYSSGRRRRYFEEGEHSFSILCGRL
RGIVLTIKCSNGIIYLSIKVSPNNRNHVFLYHKKDYVFDKLKEIFPDEAIEFTIEYEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECs4566 NP_312593.1 hypothetical protein Not tested LEE Protein 1e-61 100
unnamed ACU09456.1 conserved hypothetical protein Not tested LEE Protein 9e-62 100
ECO111_3750 YP_003236086.1 putative T3SS component protein Virulence LEE Protein 5e-60 98
unnamed AAC38385.1 Orf16 Not tested LEE Protein 4e-61 98
ECO103_3616 YP_003223473.1 T3SS component Virulence LEE Protein 1e-53 82
ECO26_5273 YP_003232155.1 T3SS component protein Virulence LEE Protein 1e-53 82
unnamed AAK26717.1 unknown Not tested LEE Protein 2e-53 82
unnamed AAL06371.1 unknown Not tested LEE Protein 2e-38 80

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECs4566 NP_312593.1 hypothetical protein VFG0732 Protein 2e-61 98