Gene Information

Name : ECs4563 (ECs4563)
Accession : NP_312590.1
Strain : Escherichia coli Sakai
Genome accession: NC_002695
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4602907 - 4603290 bp
Length : 384 bp
Strand : +
Note : similar to L0029 [Escherichia coli O157:H7 strain EDL933] gi|3414897|gb|AAC31508.1|, rOrf10 [Escherichia coli] gi|2865295|gb|AAC38388.1|

DNA sequence :
ATGAATGAGAAATTTCGCACAGACCTTGCACATACGTTTGGGATAGCTCTTGAAGAGCAAACTGACGTGCTCTCTTTCCA
CGATAACGATGGCCATGAATGGATACTGGAGTGTGCATCTCAATCTGAAATTCTGTTTTTTTATTGTTATTTATTGAATA
GCGAATCAATACAGATTAATTCAATACTTGAAATGAATAGCAATCGAGAACTGCTCGGTATGTTTTTCCTGTCATTAAAA
GATGACAACATTCTTTTAAATATTGCATTTCCTGCAGATAAAATTGATATTACAGAGTTTGCTAATTTAATGGAAAATGG
TTATCTATTAAAGAATGAGATAATTAGATCCTTGTCTTCCAGACCTACAGATTTTTTACCTTGA

Protein sequence :
MNEKFRTDLAHTFGIALEEQTDVLSFHDNDGHEWILECASQSEILFFYCYLLNSESIQINSILEMNSNRELLGMFFLSLK
DDNILLNIAFPADKIDITEFANLMENGYLLKNEIIRSLSSRPTDFLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAC31508.1 L0029 Not tested LEE Protein 2e-53 100
Z5114 NP_290263.1 hypothetical protein Not tested LEE Protein 3e-53 100
unnamed ACU09453.1 hypothetical protein Not tested LEE Protein 2e-53 100
ECs4563 NP_312590.1 hypothetical protein Not tested LEE Protein 3e-53 100
unnamed AAL57547.1 unknown Not tested LEE Protein 2e-43 80
st29 CAC81867.1 ST29 protein Not tested LEE II Protein 2e-43 80
cesF YP_003232158.1 T3SS chaperone CesF Virulence LEE Protein 2e-43 80
unnamed AAK26720.1 unknown Not tested LEE Protein 2e-43 80
cesF YP_003223470.1 chaperone CesF Not tested LEE Protein 6e-43 79
unnamed CAI43869.1 hypothetical protein Not tested LEE Protein 4e-43 79
unnamed AAC38388.1 rOrf10 Not tested LEE Protein 5e-41 79
cesF YP_003236083.1 chaperone CesF Not tested LEE Protein 4e-41 79
unnamed AAL06374.1 unknown Not tested LEE Protein 1e-40 78

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECs4563 NP_312590.1 hypothetical protein VFG0807 Protein 8e-54 100
ECs4563 NP_312590.1 hypothetical protein VFG0735 Protein 2e-41 79