Gene Information

Name : ECs4560 (ECs4560)
Accession : NP_312587.1
Strain : Escherichia coli Sakai
Genome accession: NC_002695
Putative virulence/resistance : Virulence
Product : protein CesT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4599322 - 4599792 bp
Length : 471 bp
Strand : -
Note : chaperon of Tir; similar to CesT [Escherichia coli O157:H7 strain HA1] gi|975876|gb|AAB00110.1|, CesT proteins [Escherichia coli] gi|140611|sp|P21244|YEAE_ECOLI

DNA sequence :
ATGTCATCAAGATCTGAACTTTTATTAGAAAAATTTGCAGAAAAAATTGGTATTGGATCTATTTCATTTAATGAAAACAG
ATTGTGTTCTTTTGCTATTGATGAAATTTATTATATTTCGTTATCTGATGCCAATGACGAATATATGATGATTTATGGTG
TCTGTGGGAAATTCCCGACAGATAACTCTAACTTCGCTCTTGAGATTTTGAATGCAAACTTATGGTTTGCAGAGAATGGT
GGGCCATATCTGTGCTATGAGGCTGGAGCACAATCGCTGTTGTTAGCGTTACGTTTCCCTCTCGATGATGCTACCCCTGA
AAAACTCGAGAATGAAATAGAAGTCGTTGTTAAGTCAATGGAAAACCTGTATTTGGTATTACATAATCAGGGAATAACAT
TAGAAAACGAACATATGAAAATAGAGGAAATCAGTTCAAGCGACAATAAACATTATTACGCCGGAAGATAA

Protein sequence :
MSSRSELLLEKFAEKIGIGSISFNENRLCSFAIDEIYYISLSDANDEYMMIYGVCGKFPTDNSNFALEILNANLWFAENG
GPYLCYEAGAQSLLLALRFPLDDATPEKLENEIEVVVKSMENLYLVLHNQGITLENEHMKIEEISSSDNKHYYAGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECs4560 NP_312587.1 protein CesT Virulence LEE Protein 1e-67 100
unnamed AAC31505.1 L0026 Not tested LEE Protein 1e-67 100
unnamed ACU09450.1 putative factor Tir chaperone Virulence LEE Protein 1e-67 100
Z5111 NP_290260.1 hypothetical protein Not tested LEE Protein 1e-67 100
cesT CAI43866.1 CesT protein Virulence LEE Protein 2e-67 98
cesT AAK26723.1 CesT Virulence LEE Protein 2e-67 98
cesT YP_003223467.1 chaperone CesT Not tested LEE Protein 3e-67 98
cesT AAL57550.1 CesT Virulence LEE Protein 2e-67 98
cesT YP_003232161.1 T3SS chaperone CesT Virulence LEE Protein 3e-67 98
cesT CAC81870.1 CesT protein Virulence LEE II Protein 2e-67 98
orfU AAC38391.1 OrfU Not tested LEE Protein 2e-67 97
cesT YP_003236080.1 putative chaperone CesT Not tested LEE Protein 5e-67 97
unnamed AAL06377.1 CesT Virulence LEE Protein 2e-66 95
cesT AFO66323.1 putative chaperone Not tested SESS LEE Protein 7e-61 83
cesT AFO66393.1 putative chaperone Not tested SESS LEE Protein 7e-61 83

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECs4560 NP_312587.1 protein CesT VFG0804 Protein 4e-68 100
ECs4560 NP_312587.1 protein CesT VFG0738 Protein 1e-67 97