Gene Information

Name : ECs4430 (ECs4430)
Accession : NP_312457.2
Strain : Escherichia coli Sakai
Genome accession: NC_002695
Putative virulence/resistance : Virulence
Product : fimbrial chaperone protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 4456760 - 4457458 bp
Length : 699 bp
Strand : -
Note : probable fimbrial chaperone protein, similar to chaperones e.g. LpfB [Salmonella typhimurium] gi|1170816|sp|P43661|LPFB_SALTY

DNA sequence : 
ATGGATCGAATGATGAAAAGTAAATTTGTTGCGTTGGCTCTCTCTCTGTTCCTTTCACAGTCAGTTCTGGCGGGTGGCGT
CGGACTTAGCTCTACTCGCGTAATTTATGATGGCAGTAAGAAAGAAGCCTCGCTGACCGTACAGAATAAAAGTAAGACGG
AAGAGTTTCTTATCCAATCCTGGGTGGATGATGCCGCGGGCAGCAAAAAAACACCGTTTATTATTACGCCCCCACTATTC
AAGCTTGATCCAGAAAAGAACAATATTTTGCGTATTGTGAATATTACGCCCGGCCTGCCTCAGGATCGCGAATCGGTCTA
CTGGGTTAATGTGAAAGCCATTCCATCTAAAAGTGACGACAGCGAAAACAAAAATGTTTTGCAGATTGCCGTTCGCACCC
GAATCAAACTTTTTTATCGCCCGGCAGGTTTAAAGGGTGATGTAAAAACCGCGCCAAATGAACTGCGATTTACGCGTAAC
GGTAATCAGCTCCGCGTTGATAATCCGACAGTTTTTAATATTACCTTTAATCAATTTTTTGCGAATGACAAAGAAATTGA
AAAAGCAGGCATGGTACCCGCTAAAGGGGCATTAAATATCACATTACCCGCCGGGGTAGGTAGCGTTTCTAAAATTAAAT
ATAACACCATCAATGACTTTGGATCGTCAGCGGAAATGATCACTAAAAATGTTGATTGA

Protein sequence : 
MDRMMKSKFVALALSLFLSQSVLAGGVGLSSTRVIYDGSKKEASLTVQNKSKTEEFLIQSWVDDAAGSKKTPFIITPPLF
KLDPEKNNILRIVNITPGLPQDRESVYWVNVKAIPSKSDDSENKNVLQIAVRTRIKLFYRPAGLKGDVKTAPNELRFTRN
GNQLRVDNPTVFNITFNQFFANDKEIEKAGMVPAKGALNITLPAGVGSVSKIKYNTINDFGSSAEMITKNVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 2e-42 44
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 2e-40 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECs4430 NP_312457.2 fimbrial chaperone protein VFG0455 Protein 4e-77 69
ECs4430 NP_312457.2 fimbrial chaperone protein VFG0875 Protein 2e-41 44
ECs4430 NP_312457.2 fimbrial chaperone protein VFG0911 Protein 8e-41 43
ECs4430 NP_312457.2 fimbrial chaperone protein VFG1644 Protein 9e-41 43
ECs4430 NP_312457.2 fimbrial chaperone protein VFG0445 Protein 4e-44 42