Gene Information

Name : ECs3866 (ECs3866)
Accession : NP_311893.1
Strain : Escherichia coli Sakai
Genome accession: NC_002695
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 3871323 - 3872714 bp
Length : 1392 bp
Strand : +
Note : similar to hypothetical proteins e.g. L0015 [Escherichia coli O157:H7 strain EDL933] gi|3414883|gb|AAC31494.1|

DNA sequence :
ATGAACTTCGGCAGTCGTTCCGAAAAAGTCTCCCGCCGTATCGCACAAATGGAAGCCGATCTGAACCGGCTTCAGAAAGA
GAGCGATACGCTGACTGGTAGGGTGTATGACCCGGCAGTACAGCGTCCGTTGCGTCAGACCCGCACCCGTAAGCCGTTCC
CTGAATCACTACCCCGTGACGAAAAGCGACTGTTGCCTGCGGCGCCGTGCTGCCCGAACTGCGGCGGTTCACTGAGCTAT
CTGGGCGAGGATACCGCCGAACAGCTGGAGTTGATGCGTAGCGCCTTCCGGGTTATCCGGACGGTACGGGAAAAACATGC
CTGTACTCAGTGCGATGCCATCGTGCAGGCACCTGCACCTTCGCGGCCCATCGAGCGGGGTATCGCCGGACCGGGGCTGC
TGGCCCGCGTGCTGACCTCGAAGTATGCAGAGCACACCCCGCTGTATCGCCAGTCAGAAATATACGGCCGGCAAGGTGTG
GAGCTGAGGCGTTCACTGCTGTCGGGCTGGGTGGATGCATGCTGCCGGCTGCTGTCTCCGCTGGAAGAGGCGCTTCATGG
CTATGTCATGACTGACGGCAAACTCCATGCCGATGATACCCCGGTCCAGGTACTGCTGCCGGGTAATAAGAAGACGAAGA
CCGGGCGGTTGTGGGCGTATGTTCGTGATGACCGCAATGCAGGGTCAGCGTTGGCACCTGCAGTGTGGTTCGCTTACAGC
CCGGACAGAAAAGGCATCCATCCGCAGACTCATCTTGCCTGCTTCAGCGGTGTGCTGCAAGCGGATGCGTACGCCGGGTT
CAACGAGCTGTATCGCAATGGTGGGATAACGGAAGCTGCCTGCTGGGCTCATGCCCGCCGAAAGATCCACGATGTGCACG
TCCGCATCCCGTCAGCACTGACGGAAGAAGCCCTGGAGCAGATCGGTCAGTTGTACGCCATAGAGGCGGATATAAGGGGA
ATGCCGGCAGAGCAGCGGCTTGCTGAACGTCAGCGAAAAACGAAACCGTTGTTGAAATCCCTGGAAAGCTGGTTGCGTGA
AAAGATGAAGACCCTGTCGCGACACTCAGAGTTGGCGAAGGCGTTCGCGTACGCACTTAACCAGTGGCCGGCACTGACGT
ACTATGCGAACGATGGCTGGGTGGAAATCGACAACAACATCGCTGAAAATGCCCTGCGGGCGGTCAGTCTGGGTCGTAAA
AACTTCCTGTTCTTCGGCTCTGATCATGGTGGTGAGCGGGGAGCGCTACTGTACAGCCTGATCGGGACGTGCAAACTGAA
TGACGTGGATCCAGAAAGCTACCTTCGCCATGTGCTTGGCGTCATAGCAGACTGGCCGGTCAACCGGGTCAGCGAACTGC
TTCCGTGGCGCATAGCACTGCCAGCTGAATAA

Protein sequence :
MNFGSRSEKVSRRIAQMEADLNRLQKESDTLTGRVYDPAVQRPLRQTRTRKPFPESLPRDEKRLLPAAPCCPNCGGSLSY
LGEDTAEQLELMRSAFRVIRTVREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYRQSEIYGRQGV
ELRRSLLSGWVDACCRLLSPLEEALHGYVMTDGKLHADDTPVQVLLPGNKKTKTGRLWAYVRDDRNAGSALAPAVWFAYS
PDRKGIHPQTHLACFSGVLQADAYAGFNELYRNGGITEAACWAHARRKIHDVHVRIPSALTEEALEQIGQLYAIEADIRG
MPAEQRLAERQRKTKPLLKSLESWLREKMKTLSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRK
NFLFFGSDHGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 0.0 100
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 0.0 100
unnamed AAC31494.1 L0015 Not tested LEE Protein 0.0 100
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 0.0 99
tnp AEA34686.1 transposase Not tested Not named Protein 0.0 99
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 0.0 99
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 0.0 99
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 0.0 99
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 0.0 99
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 0.0 99
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 0.0 99
unnamed AAL57570.1 unknown Not tested LEE Protein 0.0 99
unnamed AAL08460.1 unknown Not tested SRL Protein 1e-162 99
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-163 93
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 2e-151 64
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 1e-150 64
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 1e-150 64
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 4e-106 62
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 3e-136 61
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 1e-96 58
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 4e-121 56
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 1e-110 56
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 8e-111 56
EXB16 ABD94703.1 ISPpu14 transposase Orf3 Not tested ExoU island B Protein 4e-64 43
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 3e-72 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECs3866 NP_311893.1 hypothetical protein VFG0793 Protein 0.0 100
ECs3866 NP_311893.1 hypothetical protein VFG1051 Protein 6e-163 99
ECs3866 NP_311893.1 hypothetical protein VFG1700 Protein 5e-164 93
ECs3866 NP_311893.1 hypothetical protein VFG1513 Protein 2e-106 62
ECs3866 NP_311893.1 hypothetical protein VFG1736 Protein 3e-119 62