|
Name : ECs3220 (ECs3220) Accession : NP_311247.1 Strain : Escherichia coli Sakai Genome accession: NC_002695 Putative virulence/resistance : Virulence Product : chaperone Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 3178031 - 3178789 bp Length : 759 bp Strand : - Note : similar to YFCS_ECOLI gi|1788677, periplasmic fimbrial chaperone StfD protein [Salmonella typhimurium] dad|AF093503-4|AAC64154.1 DNA sequence : ATGACGAATCTATTTTGCTCTGCCAGAACGGCCGCAACGACGCTGGCGTTACTGATAACTGCCGCCAGCCTGTCAGTACA GGCCTCTGTCACGCCGGACCGTACACGCCTGATTTTTAACGAAAGTGATAAATCAATCAGCGTCACGCTGCGCAATAACG ACCCGAAAATGCCGTATCTGGCACAAAGCTGGATGGAAGATGGACAGGGTAACAGGATTAGCTCGCCACTGACGGTCCTG CCGCCAGTGCAGCGCATCGATTCCATGATGAACGGTCAGGTGAAGGTACAGGGCATGCCGGATATCAACAAGCTGCCTGC CGACCGCGAGAGCGTGTTCTATTTCAACGTGCGTGAGATCCCGCCGAAATCGAACAAACCTAACACGCTACAGATAGCGC TGCAGACGCGCATTAAGTTGTTCTGGCGACCAAAGGCGCTGGAAAACGTCAGCATGAAAAACCCGTGGCAGCATAAGGTG ACCTTAACCCTCAGTGGTCAGGAGTTTACCGTCAATAACCCGACGCCGTACTTCGTGGTTATCAGTAACGCCAGTGCGCA GAAAAATGGCAATCCGGCAGCGGGATTTTCCCCCATGGTGATATCGCCAAAAACCTCTGTGCCGTTAAAAGTCAAAATGG ATAGCGTCCCGGTGCTGACCTATGTGAATGATTATGGTGCGCGTTTGCCGCTGTTCTTCCGCTGTACGGGAAATACCTGT CAGGTGGACGAAGAGCAAAACAGCAAAGGCCAGGGATAG Protein sequence : MTNLFCSARTAATTLALLITAASLSVQASVTPDRTRLIFNESDKSISVTLRNNDPKMPYLAQSWMEDGQGNRISSPLTVL PPVQRIDSMMNGQVKVQGMPDINKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALENVSMKNPWQHKV TLTLSGQEFTVNNPTPYFVVISNASAQKNGNPAAGFSPMVISPKTSVPLKVKMDSVPVLTYVNDYGARLPLFFRCTGNTC QVDEEQNSKGQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 9e-47 | 42 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 2e-46 | 42 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 3e-46 | 42 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 3e-46 | 42 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 3e-46 | 42 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 2e-46 | 42 |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 8e-47 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECs3220 | NP_311247.1 | chaperone | VFG1547 | Protein | 5e-47 | 42 |
| ECs3220 | NP_311247.1 | chaperone | VFG0896 | Protein | 1e-46 | 42 |
