Gene Information

Name : ECs1317 (ECs1317)
Accession : NP_309344.1
Strain : Escherichia coli Sakai
Genome accession: NC_002695
Putative virulence/resistance : Resistance
Product : outer membrane protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG2194
EC number : -
Position : 1387988 - 1389274 bp
Length : 1287 bp
Strand : -
Note : similar to hypothetical proteins e.g. yjdB in basS-adiY intergenic region [Escherichia coli] gi|731986|sp|P30845|YJDB_ECOLI

DNA sequence :
ATGACATCATATTTCAATATGTCTGTTGTACTGTGGTTTTTATTTACGGGTATACTTCCATGTGGACTATTGTTGTTAGT
AAATATCCGTTATCCTGAGACATGGATAAAGGGTATTACATATCGTTTAATATCAATGTTTGCATCTCTCTTGATTATAT
TTGCGATTGCGTTTTTCTTTTATAAGGATTATGCATCAGTTGGCAGAAACAACTCTTCATTAAATAAAGAAATAATACCT
ACTAATTATATCTACAGTGGGTTTAAATATGTAAGGGATTTTTTTGTTTCTCCTGGCGAGTTTCGTCAGACTGGAACGGA
TGCATCCCGCACAATAAATGAAAAACAAAAGCCGGTAATTATGTTTTTAGTTGTCGGGGAGACAGCAAGAAGTCAAAACT
ATGCTCTGAATGGATATTCTCGTGGTACCAATGATTTTACAAAGAAATATAATGAACTTATATCCTTTCATAATGTGCAG
TCGTGTGGCACATCCACAGCCATATCTGTTCCATGCATGTTTTCAGATATGAAGCGAAAAGAGTTCAATTCCCGCAAAGC
GGTAAATTCGGAAAATGTACTGGATATTCTGTACAGAACGGGGGTAAATTTACTCTGGATTGAAAATGACGGGGGATGTA
AAGGTGTATGTAAGCGAATCCCTACAATTAATATTGAGCCATCAAATTCAGATAATACATTATGCAAGAAAAACTCATGT
TATGATGAGGTTATGCTAAAAAATATTGATGAGTATATAAATAATAACTCAGAGGATAAACTTATCGTATTTCATTTGAT
GGGTAGTCATGGTCCTACCTACTATCTCCGTTATCCTGAGTCACATAAATATTTTAAACCAACATGTGATCGTAGTGATA
TCGAAAATTGTACGCATGAGCAATTGATTAATACCTATGATAATACAATTCGCTATACTGATTATATAATATCAAAATTA
ATTGACAAGCTTATCGAATATAAAGATGAGTATGATACTGTTTTATTATATGTCTCTGACCATGGAGAATCTCTGGGAGA
AAATGGATTATACTTACATGGAACACCATATAATGTTGCTCCAGCTGAGCAAACGCATGTGCCTCTTATTACCTGGATGT
CTCCGGGGTTCGTTTCCTCTAAAAAAATTGATTTGAATTGTTTGTCAGAACATGCTCTAAACAGAACAGTAAGTCATGAT
AATATATTTTCATCGTTACTGGGGTTATGGAATGTAAATACTTCAGTTTATAATAAAGAAGATGATATTATATCCTCCTG
CAGATAG

Protein sequence :
MTSYFNMSVVLWFLFTGILPCGLLLLVNIRYPETWIKGITYRLISMFASLLIIFAIAFFFYKDYASVGRNNSSLNKEIIP
TNYIYSGFKYVRDFFVSPGEFRQTGTDASRTINEKQKPVIMFLVVGETARSQNYALNGYSRGTNDFTKKYNELISFHNVQ
SCGTSTAISVPCMFSDMKRKEFNSRKAVNSENVLDILYRTGVNLLWIENDGGCKGVCKRIPTINIEPSNSDNTLCKKNSC
YDEVMLKNIDEYINNNSEDKLIVFHLMGSHGPTYYLRYPESHKYFKPTCDRSDIENCTHEQLINTYDNTIRYTDYIISKL
IDKLIEYKDEYDTVLLYVSDHGESLGENGLYLHGTPYNVAPAEQTHVPLITWMSPGFVSSKKIDLNCLSEHALNRTVSHD
NIFSSLLGLWNVNTSVYNKEDDIISSCR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1140 NP_286675.1 hypothetical protein Not tested TAI Protein 0.0 100
Z1579 NP_287083.1 hypothetical protein Not tested TAI Protein 0.0 100

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECs1317 NP_309344.1 outer membrane protein BAC0485 Protein 3e-86 44