|
Name : TVN0500 (TVN0500) Accession : NP_111019.1 Strain : Thermoplasma volcanium GSS1 Genome accession: NC_002689 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 487279 - 489285 bp Length : 2007 bp Strand : + Note : One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : GTGAACCAGAACATAATTTACACGGTTTATGGAGATTTAAAGTTGACACTTAAAAACATGAGGCCGGATGTACTCCTTCA CAATCCAGTAATGTTTCTAACCGAAGTATCACTCTTTGTATCTATTTTTATATACATTTTCCCCAGTTTCTTCGGCGTGC CATACACTGGTACGTATAGATCTTTTTATGTTGCAGTAGTTGTGTTGTTGTTCCTTACTGTGTTTTTTTCAAGCATAAGC ACTGCTTTGTCCGAAGGAAAGAGTAAAGCAATAACTGATTCATTAAAGAAATTCAAGACCGATGTTATTGCTCACGTACA AAAAGATGGAAATATAGTCGATGTGAGATCGAACGAACTGAAAAAGAATGATATAATAATTATTTACAAAGACGAAATAG TGCCAATAGATGGAGAAGTAATTGAAGGCTCAGGCTACGTAGATGAATCTAACGTAACGGGAGAATCACGGGCAGTAATG AAGGTAATCGGCGATACCGTTACTGGATCGACGAGGCTTGTTACAGATAAACTAAAGATAAGGGCTACAGCAGACCCAGG CAGCACGTTTATAGATAAGATGATCGAACTCGTTGAAAAGTCGACTAGAGAAAAGACTCCAAACGAAATATCGCTTACCG TATTCTTGTCAGGTCTTACACTTATTTTCCTCGTAATAACTGCTTCTATATTCGCTATTTCACATTACTTTGGAAGGACA GCAAATATTGTGATGCTCATAGTTTTGCTGATAGCTCTGATTCCAACAACAATTGGAGCACTGTTGCCGGCAATAGGTAT AGCTGCAATAAATAAGGTATCCGAATACAATATAATTGCAAAGAGTGGGAGGGCAATAGAGAACGCTGGAGACATAGACA CTATAATCCTAGACAAAACCGGAACAATTACCATAGGAGAAAGGAAAGCTGTAAAATTCTATCCGAACAAGGGCATATCA GACGTAGAGTTTGCAAAACTTGCCGCCATGTCATCATACTACGATCAGACTAAGGAAGGCCTATCGATTTTCGAACTGGC AAAAAAACAAGGAGCAGAGATAAGCAAAGACGATCTTAAGGGTTATGAGTTCATACCATTCTCGTCTGAAACAAAATTCA GTGGTATACAATCTCCTAGCGATACTGTAATAAAGGGATCCCTTAAGGCCTTAAAGGAGAAGTTCCAAGTCGCAGATGAA TTCATAGAAGCATTATGCAAGGAAATATCTATGCGAGGAGGTACAGCCATACCTGTTGTTCACAATGGGAAGTTTGCTGG TGTCATCGAACTTCAGGATTTGATAAAGCCTGGCATTAAAGAGAGAATATCCGAGATTAAAAACATGGACATAAAGACGG TTATGTGCACAGGCGATGACGAGGTAACAGCACAATACATATCGGCCCAGGCAGGCATCGACGAATATATTGCCAACTCT AAGCCGGTGGACAAGTACAACGTTGTGATAAGGGAGAAGGAGGGCCAGAGGATGGTTGCCATGGTCGGAGATGGGACGAA CGATGCACCAGCTTTGGCTAAGGCGGATGTTGGGCTGGCAATGAACAATGGTACTCAGGCCGCAAAAGAGGCCGCAAATA TGATCGATTTAGACAGCAATCCGACAAAGCTTATGGATGTAATATTTCTTGGCAAGCAGATACTCATAACTAGAGGATCG CTAACAACGTTTAGTATAGCAAATGATATATCGAAGTATTTCGTAATAATACCAGCTATATTTTATATGTTTCCAAGTTT ATCTCTCGTGAATATCCTTGACTTGACAGATCCCATAGTTGCAGTTACATCAGCTTTGATCTTCAATACTATCATTATAG TCTTTTTGATACCGTTGGCATTAGGCGGAGTACATTATAAACCCACATCAATTTCTGAGATGCTAAAGCGCAACCTTATG ATATATGGTATTGGGGGAGTTATTACACCTTTTATAGCTATTAAGCTCATATATATGCTGCTCATTGCATGGGGGGTGAC ATGGTGA Protein sequence : MNQNIIYTVYGDLKLTLKNMRPDVLLHNPVMFLTEVSLFVSIFIYIFPSFFGVPYTGTYRSFYVAVVVLLFLTVFFSSIS TALSEGKSKAITDSLKKFKTDVIAHVQKDGNIVDVRSNELKKNDIIIIYKDEIVPIDGEVIEGSGYVDESNVTGESRAVM KVIGDTVTGSTRLVTDKLKIRATADPGSTFIDKMIELVEKSTREKTPNEISLTVFLSGLTLIFLVITASIFAISHYFGRT ANIVMLIVLLIALIPTTIGALLPAIGIAAINKVSEYNIIAKSGRAIENAGDIDTIILDKTGTITIGERKAVKFYPNKGIS DVEFAKLAAMSSYYDQTKEGLSIFELAKKQGAEISKDDLKGYEFIPFSSETKFSGIQSPSDTVIKGSLKALKEKFQVADE FIEALCKEISMRGGTAIPVVHNGKFAGVIELQDLIKPGIKERISEIKNMDIKTVMCTGDDEVTAQYISAQAGIDEYIANS KPVDKYNVVIREKEGQRMVAMVGDGTNDAPALAKADVGLAMNNGTQAAKEAANMIDLDSNPTKLMDVIFLGKQILITRGS LTTFSIANDISKYFVIIPAIFYMFPSLSLVNILDLTDPIVAVTSALIFNTIIIVFLIPLALGGVHYKPTSISEMLKRNLM IYGIGGVITPFIAIKLIYMLLIAWGVTW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 9e-108 | 47 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 9e-108 | 47 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-107 | 47 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-107 | 47 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-107 | 47 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-107 | 47 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 1e-107 | 46 |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 1e-107 | 46 |
