|
Name : mlr1190 (mlr1190) Accession : NP_102838.1 Strain : Mesorhizobium loti MAFF303099 Genome accession: NC_002678 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 1001613 - 1003235 bp Length : 1623 bp Strand : + Note : - DNA sequence : ATGAGCTTGCTGGAAATCGACAACCTGTCGCTGACCATCGGCGACACGCAGATCCTGAAGGACATGGAACTCTCCGTCGC GCCCGGCGAGGTGATGGGGCTGGTCGGCGAATCCGGCTCCGGCAAGTCGATGACGGCGCTGACGGTGATGCAGCTTCTGC CGCATGCCGCACGCGCCAGCGGGCGCGTCACCTTCGACGGCATCGACATCCTCGCGGCAACCGAAGACCAGATGTGCGCT CTGCGCGGCGACGACATCGGTATGGTGTTCCAGGAGCCGATGACGGCCCTCAATCCAGTCAAGACCATCGGCGAACAGGT CGCCGAAGGCATACGCTGGCACACCAAGGTCACACGTGCCGCGGCTGAAGAGCGGGCGCGAAAAATGCTCGACCGCGTTG GCCTGCCCGCGGCAAAATTCCCGCTGTCGCGCTATCCGCACGAACTGTCGGGCGGCCAGCGCCAGCGCGTCGTCATCGCC ATCGCCTGCGCGCTGAAGCCGAAGCTTTTGATTGCCGACGAGCCGACGACGGCGCTCGACGTGGTGCTGCAGGCGCAGAT CCTAGACCTCCTGCGCGACCTCGTCGCGGAGAGCCGCATGGGGCTGCTCCTGATCTCGCACGATCTCGCCGTGGTGACCG AGATGGCCGATCGCATCACCATCCTGCGCCGCGGCGAGGTGATGGAGGCCGGCGACACCGCCCGCACGCTGTCCGAGCAG CTCCATCCCTATACGCGCCAGCTGGCGCAGGCCTCGATGCATGTGCCGGCACGCGCCAGGCCGCATGATGCAAGTCAGGG CAAGCCCCTGATCCAGGTCGAAGGCGTGACCCGCGACTATCCCGGGCGGCACACCTCCCTGTTCAAACGGGCAGCCCCTA TCCGCGCCGTCGACGATGTGTCGCTGTCGATGCAGCCGGGCCAGTCGGTGGCGCTGGTCGGCCGCTCCGGCTGCGGCAAG TCAACGCTCGCCCGCATGATCCTGGCGCTGGACAAGCCGAGTTCGGGCACGATCCGGTTTCGCGGCGAGACCATTACCGG CAAGAGCGAAGCCGAATTGAAGCCCGCCCGGCGCGACATGCAGGTTGTGTTCCAAGATCCCTACGGCTCCTTCGATCCGC GCCAGAAGGTCGAAAAGCTGGTCGCCGAGCCCTTGCACGTGCTGGACAAGAAGCCGACGCGAGCCGAGCGCCTCGAGATG GTGGCGCACGCACTGCACGAGGTCGGCCTCGACCAGCGCGACATGGACAAATACCCGCACGAATTTTCGGGCGGCCAACG CCAGCGCCTGTCGATCGCCCGCGCCATCATCACCCGCCCGAAACTGGTTGTCGCCGACGAGCCGGTCTCGGCGCTCGATG TCTCAATCCGAGCGCAAATCCTCGACCTGTTCGCCGCGCTCAACCAGAAGCTCGGCATCGCCTATCTCTTCATCACCCAT GATCTGACCGTTGCGCGGGCCATCACGGACGAGGTGCTGGTCATGCATGACGGCAGGATCGTCGAGCGCGGCAAGACGAG CGAAGTGCTCGATCATCCGCAATCCGAGGCCGCCAGGGCGCTGGTCGCCGCGGCCCCGGACCTGCACCGGGCAATTGCTC GGCGGATGCAAGAGCAAGGGTGA Protein sequence : MSLLEIDNLSLTIGDTQILKDMELSVAPGEVMGLVGESGSGKSMTALTVMQLLPHAARASGRVTFDGIDILAATEDQMCA LRGDDIGMVFQEPMTALNPVKTIGEQVAEGIRWHTKVTRAAAEERARKMLDRVGLPAAKFPLSRYPHELSGGQRQRVVIA IACALKPKLLIADEPTTALDVVLQAQILDLLRDLVAESRMGLLLISHDLAVVTEMADRITILRRGEVMEAGDTARTLSEQ LHPYTRQLAQASMHVPARARPHDASQGKPLIQVEGVTRDYPGRHTSLFKRAAPIRAVDDVSLSMQPGQSVALVGRSGCGK STLARMILALDKPSSGTIRFRGETITGKSEAELKPARRDMQVVFQDPYGSFDPRQKVEKLVAEPLHVLDKKPTRAERLEM VAHALHEVGLDQRDMDKYPHEFSGGQRQRLSIARAIITRPKLVVADEPVSALDVSIRAQILDLFAALNQKLGIAYLFITH DLTVARAITDEVLVMHDGRIVERGKTSEVLDHPQSEAARALVAAAPDLHRAIARRMQEQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-84 | 45 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-84 | 45 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-84 | 45 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-84 | 45 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-95 | 43 |
