Gene Information

Name : mll6432 (mll6432)
Accession : NP_106945.1
Strain : Mesorhizobium loti MAFF303099
Genome accession: NC_002678
Putative virulence/resistance : Unknown
Product : symbiosis island integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 5254244 - 5255569 bp
Length : 1326 bp
Strand : -
Note : -

DNA sequence : 
ATGGAGGCCCCGAAAATGGCTCTTTCCGACGTAAAATGCCGTAATGCCCGACCCGCTTCCAAGCTCGTGAAATTGTCTGA
CGGTGGCGGGCTCCAGCTTTGGGTGCAGCCTACCGGATCTCGCCTATGGCGCCTCGCCTATCGTTTTGGCGGCAAGCAGA
AGCTTCTGGCGTTGGGCAGCTATCCCCTCATCTCCCTCGCTGAGGCACGCGAGGCGCGCGATACCGCCAAACGTCTCCTC
CTACGTGGCATCGACCCCGCACAGGAGCGTAAGTCGCAAAAGGCTTCGGCGGAGGACACCTTTCGCTCAATCGCGGAGGA
CTATGTCGACAAGCTGAAGAAGGAGGGACGTGCCGACCGGACCATCACCAAGGTCAAATGGCTGCTCGACTTTGCCTATC
CAACGTTTGGGGACAAAAGCGTTCGGGAGATCGATCCGGCTACAATTCTTGCCGCTCTCCGCAGCGTGGAGGTTCGTGGT
CGATACGAGTCGGCCAGGCGAATGCGCTCCACCATCGGCAGCGTGTTTCGATATGCAATCGCAACCGCACGCGCCGATGT
AGATCCGACGATCGCCCTGAGGGGCGCACTCGTCGGTCCGACGGTCACGCCCCGTGCCGCGGTTACCGATCCTAAGGCCT
TGGGAGGCTTGCTGAGGGCGATTAATGCATTTGACGGACAGCCTACAACCCGAGCCGCTCTGAAGCTGATGGCCCTGCTA
TTTCCCCGCCCCGGCGAGCTGCGCGCGGCCGGATGGGACGAGTTCGATTTCGAAAGCTCGGTGTGGAGCATCCCTGAAGG
ACGCATGAAGATGCGACGGCCGCACCGCGTACCTCTTTCCACGCAGGCCGTCAGCGTCCTGACCTCACTTAGAGAAATCT
CTGGTGGTGGATCGCTGTTGTTTCCTAGTGTTCGATCGGGTTCGCGTCCGATTTCCGACAACACGCTTAACGCCGCCCTT
CGCCGTATGGGCTATGGCAAAGAAGAAGCTACCGCGCACGGCTTTCGAGCAACGGCATCAACTCTGCTAAACGAATGCGG
CAAGTGGCACCCGGACGCCGTAGAGCGGCAGCTGGCCCACATTGAGAACAACGACGTTCGGCGCGCCTATGCCCGGGCAG
AGCACTGGGAAGAGCGCGTCAGGATGATGCAATGGTGGGCCGATTATCTGGATGAACTCGAGAGCAAAAACTCGCGGGTG
GTCTCAATCGGGGGACGCGAGGCAAGCCTGCTGTCCATACATCCTCGCGAGGGTCTAGTTTGGAAGCCAACAGCGACGGT
TCGCCAAACGACGAGTCGAACCTCCAACCTCCGAAAATCACACTGA

Protein sequence : 
MEAPKMALSDVKCRNARPASKLVKLSDGGGLQLWVQPTGSRLWRLAYRFGGKQKLLALGSYPLISLAEAREARDTAKRLL
LRGIDPAQERKSQKASAEDTFRSIAEDYVDKLKKEGRADRTITKVKWLLDFAYPTFGDKSVREIDPATILAALRSVEVRG
RYESARRMRSTIGSVFRYAIATARADVDPTIALRGALVGPTVTPRAAVTDPKALGGLLRAINAFDGQPTTRAALKLMALL
FPRPGELRAAGWDEFDFESSVWSIPEGRMKMRRPHRVPLSTQAVSVLTSLREISGGGSLLFPSVRSGSRPISDNTLNAAL
RRMGYGKEEATAHGFRATASTLLNECGKWHPDAVERQLAHIENNDVRRAYARAEHWEERVRMMQWWADYLDELESKNSRV
VSIGGREASLLSIHPREGLVWKPTATVRQTTSRTSNLRKSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 4e-64 42
ECO111_3718 YP_003236059.1 putative integrase Not tested LEE Protein 1e-67 41
c5216 NP_757064.1 prophage P4 integrase Not tested PAI II CFT073 Protein 7e-69 41
APECO1_3534 YP_854214.1 P4-like integrase Not tested PAI I APEC-O1 Protein 2e-68 41
ORF_1 AAZ04412.1 phage integrase Not tested PAI I APEC-O1 Protein 1e-68 41
S4822 NP_838459.1 P4-type integrase Not tested SHI-1 Protein 7e-69 41
SF2964 NP_708738.1 P4-type integrase Not tested SHI-1 Protein 7e-69 41
int AAT48697.1 CP4-like integrase Not tested PAI I 4787 Protein 7e-69 41
int AAK16198.1 Int Not tested PAI-I AL862 Protein 5e-69 41
c3556 NP_755431.1 prophage P4 integrase Not tested PAI I CFT073 Protein 3e-69 41
int ADD91747.1 P4 integrase Not tested PAI-I AL862 Protein 5e-69 41
intP4 CAE85151.1 CP4 integrase protein Not tested PAI V 536 Protein 4e-69 41
ECUMN_3322 YP_002414004.1 integrase Not tested Not named Protein 4e-68 41
int AAL51003.1 CP4-like integrase Not tested LEE Protein 9e-69 41
intB CAD42017.1 bacteriophage P4 integrase Not tested PAI II 536 Protein 1e-66 41
SESS1296_03598 AFO66301.1 bacteriophage integrase Not tested SESS LEE Protein 9e-68 41
SESS1635_03816 AFO66367.1 bacteriophage integrase Not tested SESS LEE Protein 9e-68 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mll6432 NP_106945.1 symbiosis island integrase VFG0626 Protein 3e-69 41
mll6432 NP_106945.1 symbiosis island integrase VFG1693 Protein 1e-69 41
mll6432 NP_106945.1 symbiosis island integrase VFG1536 Protein 7e-67 41