Gene Information

Name : mlr8766 (mlr8766)
Accession : NP_106869.1
Strain : Mesorhizobium loti MAFF303099
Genome accession: NC_002678
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4790
EC number : -
Position : 5160419 - 5161084 bp
Length : 666 bp
Strand : +
Note : part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response

DNA sequence : 
ATGACTGAGCTCCAGCCGCCAATCCTGGCGCTTCTCGCAGTTACCGCCGGACTGGGTCTGCTGGTTTTGGTGGTCGTCAC
GACCACGGCCTTTGTAAAGGTATCGGTTGTTCTTTTCCTCGTGCGCAATGCGCTCGGGACTCAGACGATACCACCTAACA
TAGCGCTGTACGCTGTCGCATTGATCCTCACCATGTTTCTTAGCGCGCCCGTTGTTGAACAGACCTATGATCGGATGACC
GATCCGAAGCTACATTATCAGACGTTCGACGACTGGGTAAGCGCCGCCAAATCCGGGAGCGAGCCCCTGCGTGATCATCT
TAAGAAGTTCACAAATGAGGAGCAGCGACAGTTTTTCCTCTCGTCTACCGAAAAAGTCTGGCCAGCGGAAATGCGTGCCA
AAGCCACGGTTGATGATTTGTCCATTCTGGTTCCATCTTTTCTAATTTCAGAGCTAAAGCGCGCGTTTGAGATCGGATTT
CTTCTTTATCTTCCTTTCATCGTTATTGATCTTATTGTGACGACAATTTTGATGGCGATGGGCATGTCTATGGTATCCCC
GACGCTTATATCTGTCCCTTTCAAACTCTTCGTGTTCGTCGCTATTGATGGCTGGTCGAAATTGATGCACGGGCTTGTGT
TGAGTTACACGATACCGGGAGGTTGA

Protein sequence : 
MTELQPPILALLAVTAGLGLLVLVVVTTTAFVKVSVVLFLVRNALGTQTIPPNIALYAVALILTMFLSAPVVEQTYDRMT
DPKLHYQTFDDWVSAAKSGSEPLRDHLKKFTNEEQRQFFLSSTEKVWPAEMRAKATVDDLSILVPSFLISELKRAFEIGF
LLYLPFIVIDLIVTTILMAMGMSMVSPTLISVPFKLFVFVAIDGWSKLMHGLVLSYTIPGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscR AAO18040.1 LscR Virulence TTSS locus Protein 2e-39 52
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 6e-38 48
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 6e-38 48
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 6e-38 48
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 5e-36 48
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 3e-36 48
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 3e-36 48
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 4e-36 48
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 4e-36 48
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 4e-36 48
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 2e-35 47
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 2e-35 47
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 8e-33 47
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 1e-36 46
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 1e-32 46
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 1e-32 46
hrcR NP_791222.3 type III secretion protein HrcR Virulence Hrp PAI Protein 4e-33 45
hrcR AAG33884.1 HrcR Virulence Hrp PAI Protein 3e-33 45
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 4e-31 45
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 4e-31 45
escR AAL57527.1 EscR Virulence LEE Protein 6e-31 45
escR CAC81847.1 EscR protein Virulence LEE II Protein 6e-31 45
escR CAI43889.1 EscR protein Virulence LEE Protein 6e-31 45
unnamed AAL06354.1 EscR Virulence LEE Protein 7e-30 45
escR YP_003223490.1 T3SS structure protein EscR Virulence LEE Protein 8e-31 45
escR YP_003232138.1 type III secretion system protein Virulence LEE Protein 8e-31 45
escR AAK26700.1 EscR Virulence LEE Protein 6e-31 45
escR YP_003236103.1 T3SS structure protein EscR Virulence LEE Protein 1e-30 44
escR NP_290283.1 type III secretion system protein Virulence LEE Protein 1e-30 44
escR AAC38369.1 EscR Virulence LEE Protein 5e-31 44
ECs4583 NP_312610.1 type III secretion system protein Virulence LEE Protein 9e-31 44
escR AAC31528.1 L0049 Virulence LEE Protein 7e-31 44
escR ACU09473.1 type III secretion system protein EscR Virulence LEE Protein 7e-31 44
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-28 43
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-28 43
spaP NP_457284.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 2e-24 42
spaP NP_806493.1 surface presentation of antigens protein SpaP Virulence SPI-1 Protein 2e-24 42
spaP YP_217809.1 surface presentation of antigens protein SpaP Virulence SPI-1 Protein 2e-24 42
spaP NP_461811.1 surface presentation of antigens protein SpaP Virulence SPI-1 Protein 2e-24 42
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 2e-31 41
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 2e-31 41
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 1e-31 41
yscR NP_456109.1 putative type III secretion protein Virulence SPI-2 Protein 4e-31 41
yscR NP_805090.1 type III secretion system protein Virulence SPI-2 Protein 4e-31 41
spaP NP_311752.1 surface presentation of antigens protein SpaP Not tested LIM Protein 3e-30 41
epaP AAZ31293.1 EpaP Virulence ETT2 Protein 7e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mlr8766 NP_106869.1 type III secretion system protein VFG0188 Protein 4e-39 51
mlr8766 NP_106869.1 type III secretion system protein VFG0394 Protein 3e-37 49
mlr8766 NP_106869.1 type III secretion system protein VFG0044 Protein 8e-40 48
mlr8766 NP_106869.1 type III secretion system protein VFG0827 Protein 4e-31 44
mlr8766 NP_106869.1 type III secretion system protein VFG0715 Protein 3e-31 44
mlr8766 NP_106869.1 type III secretion system protein VFG1012 Protein 1e-30 43
mlr8766 NP_106869.1 type III secretion system protein VFG0551 Protein 6e-25 42
mlr8766 NP_106869.1 type III secretion system protein VFG2338 Protein 7e-26 42
mlr8766 NP_106869.1 type III secretion system protein VFG0519 Protein 6e-32 41
mlr8766 NP_106869.1 type III secretion system protein VFG1773 Protein 2e-30 41