Gene Information

Name : mlr4457 (mlr4457)
Accession : NP_105325.1
Strain : Mesorhizobium loti MAFF303099
Genome accession: NC_002678
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3544407 - 3545090 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGCGACTTCTTCTTGTCGAGGACGACCAAAAGACAGCGGACTATATCGTCAGGGGACTGACCGAGGCCGGCCATGTCTG
CGACCTCCTGCGCAACGGCCATGACGCGCTTTTCGCCGCCACCAGCGGCAGCTATGACGTGATCGTCGCCGACCGCATGA
TCCCGGGTCTCGACGGCCTGTCGATGGTCAAGGCGGCGCGCGCGGCGGGCGTGCGCACGCCGGCGATCTTCCTCACCTCC
ATCGGCGGCATCGACGATCGCGTCGAGGGTCTGGAGGCCGGCGGCGACGACTATCTGGTCAAGCCTTTCGCCTTTTCCGA
GCTGCTTGCCCGCATCAACGCGCTTGGCCGGCGGCCGGCGGCGCAGGAGCAGAAGACGGTGCTGCGGGTCGCCGACCTCG
AAATGGACCTCATCATGCGGCGCGTCACGCGCCAGGGCCAGCCGATCGACCTGCAGCCGCGCGAATTCAGCCTGCTCGAG
GTGCTGATGCGCGGCGAGGGCCGCGTCATCACCCGCACCATGCTTCTGGAGCGCGTCTGGGACTTTCATTTCGATCCCAA
GACCAGTGTCGTCGAGACCCATATCAGCCGGCTGCGGGCCAAGGTCGACAAGCCGTTCGAGGCCCAGCTCATCCATACCA
TCCGCAACACCGGCTACAGCCTGCACGCACCGCTTGCGCCATGA

Protein sequence : 
MRLLLVEDDQKTADYIVRGLTEAGHVCDLLRNGHDALFAATSGSYDVIVADRMIPGLDGLSMVKAARAAGVRTPAIFLTS
IGGIDDRVEGLEAGGDDYLVKPFAFSELLARINALGRRPAAQEQKTVLRVADLEMDLIMRRVTRQGQPIDLQPREFSLLE
VLMRGEGRVITRTMLLERVWDFHFDPKTSVVETHISRLRAKVDKPFEAQLIHTIRNTGYSLHAPLAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-43 46
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-43 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mlr4457 NP_105325.1 two-component response regulator BAC0638 Protein 1e-46 50
mlr4457 NP_105325.1 two-component response regulator BAC0125 Protein 2e-50 49
mlr4457 NP_105325.1 two-component response regulator BAC0083 Protein 7e-52 49
mlr4457 NP_105325.1 two-component response regulator BAC0111 Protein 1e-52 48
mlr4457 NP_105325.1 two-component response regulator BAC0197 Protein 3e-49 48
mlr4457 NP_105325.1 two-component response regulator BAC0308 Protein 5e-48 46
mlr4457 NP_105325.1 two-component response regulator BAC0347 Protein 1e-45 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mlr4457 NP_105325.1 two-component response regulator VFG0596 Protein 4e-44 46
mlr4457 NP_105325.1 two-component response regulator VFG1389 Protein 5e-32 44