|
Name : mlr3749 (mlr3749) Accession : NP_104787.1 Strain : Mesorhizobium loti MAFF303099 Genome accession: NC_002678 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 3016369 - 3018420 bp Length : 2052 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : GTGTCGCGCACCTTTTCAAGGGCGCTCCCAAGCCCCCAAACCCCCACCTTTGGAGGAACCATGACGTCGCGTGAACAACA TGATCGGATGGCCAATGCGATCCGCTTTCTCTCCATGGATGCCGTCGAGAAGGCCCAGTCCGGCCATCCCGGCCTGCCCA TGGGCTGCGCCGACATTGCAACGGTGCTGTTCACCCGCTTCCTGAAATACGATCCCAAAGCCCCGCACTGGCCCGACCGC GACCGCTTCATCCTGTCGGCTGGCCATGGCTCGATGCTGCTCTATTCGCTGCTGCATCTGACCGGCTACGAAGACATGAC CATCGACCAGATCAAGCACTTCCGCCAGCTCGGCTCCAAGACCGCCGGCCATCCCGAATACGGCCACGCCACCGGCATCG AGACGACGACCGGCCCGCTCGGCCAGGGCCTCGCCAATTCGGTTGGCTTCGCGCTCGGCGAGCGCATCATGAACGCCGCT TTCGGCAACGACCTCGTCAGCCACTACACCTATGTGCTGGCCGGCGACGGCTGCCTGATGGAGGGCGTTTCCCAGGAAGC CATTGCGCTGGCCGGGCATCTCAAGCTCAACAAGCTGATCGTCTTCTGGGACAACAACAACATCTCGATCGACGGCCCGG TCTCGCTGGCCGACAACACCGACCAGGTTGCCCGTTTCCAGGCCTCCGGCTGGAACGCCAGCCATATCGACGGCACCGAT CCGGAAGCCATCGCCTACGCCATCGAAGCCGCCCGCCATTCCGACAAGCCGACGATGATCGCCTGCAAGACGACCATCGG CTTCGGCGCGCCGACCAAGGCCGGCACCAACAAGGCACACGGTTCGCCGCTCGGCGCCGACGAGATCGCCGGTGCGCGCA AGTTCTTCAACTGGGAGTCGCCGCCCTTCGAGATTCCGGCCGACATCCTCGATGCCTGGCGCACCGCCGGCAAGGCCGGA GCCAAGCCGCGCGCCGACTGGGAAGGCCGTCTCGCCAAGGCCGAGCCGAAGCTGAAGGCCGAGTTCGAGCGCCGGCTCGC CGGCAAGCTGCCGTCCAATTTCGACGCCGTCATCGCCGACTACAAGAAGAAGCTCTCGGCCGACAAGCCGAAGGTCGCCA CCCGCAAATCGTCGGAAATGGCGCTTGAGGTCATCAACGGCGCCGTTCCGGAAACTATCGGCGGCTCCGCCGACCTGACC GGCTCCAACAACACCAAGACCAGCCAGACCAAGAACATCACGCCGGACGATTACGGCCAGCGCTATGTCCACTACGGCAT CCGCGAGCACGGCATGGCGGCGGCCATCAACGGCCTGACGCTGCATGGCGGCCTCATCGCCTATGGCGGCACCTTCATGT GCTTCTCCGACTATGCTCGCCCGTCGATGCGGCTTTCCTCGCTGATGGGCATCCGCTCGATCTTCGTCATGACCCATGAT TCCATCGGTCTGGGCGAGGACGGCCCGACCCACCAGCCGGTCGAGCATCTGGCAGCGCTGCGCGCCATTCCCAACCACAA TGTCTTCCGCCCGGCCGACGCCGTGGAAACCGCGGAATGCTGGCAGATCGCGCTCGAATCCGAAAAGACGCCGTCGACGC TGGCGCTGACCCGCCAGAACCTGCCGACGGTGCGCATCGAGCACTCGGCCAAGAACCTGAGCAGCCAGGGCGCTTACGAA CTGGCCGCGGCCAGCGGCGAGGCGGCAGTGACGATCTTCGCCACCGGCTCCGAGGTCGAGATCGCACTCGGCGCCCGCGA CCTGCTCGAGAAGCATGGCCACCCGACCCGCGTCGTGTCGGTGCCTTGCTTCGAGCTGTTCGACAAGCAGAGCGACGACT ACCGCAAGAAGACGATCGGCAACGCGCCTATCAAGATGGCGATCGAGGCCGGCATCCGCCAGGGTTGGGACCATCTCATC GGCTCGGACGGCATCTTCGTCGGCATGACCGGCTTCGGCGCCTCGGGCACGATCGAGCAGCTCTACCCGCATTTCGGCAT CACCGCCGAGGCGGCGGCCAAGGCGGCGGAAGCCCGCCTGCACGCCAAGTAA Protein sequence : MSRTFSRALPSPQTPTFGGTMTSREQHDRMANAIRFLSMDAVEKAQSGHPGLPMGCADIATVLFTRFLKYDPKAPHWPDR DRFILSAGHGSMLLYSLLHLTGYEDMTIDQIKHFRQLGSKTAGHPEYGHATGIETTTGPLGQGLANSVGFALGERIMNAA FGNDLVSHYTYVLAGDGCLMEGVSQEAIALAGHLKLNKLIVFWDNNNISIDGPVSLADNTDQVARFQASGWNASHIDGTD PEAIAYAIEAARHSDKPTMIACKTTIGFGAPTKAGTNKAHGSPLGADEIAGARKFFNWESPPFEIPADILDAWRTAGKAG AKPRADWEGRLAKAEPKLKAEFERRLAGKLPSNFDAVIADYKKKLSADKPKVATRKSSEMALEVINGAVPETIGGSADLT GSNNTKTSQTKNITPDDYGQRYVHYGIREHGMAAAINGLTLHGGLIAYGGTFMCFSDYARPSMRLSSLMGIRSIFVMTHD SIGLGEDGPTHQPVEHLAALRAIPNHNVFRPADAVETAECWQIALESEKTPSTLALTRQNLPTVRIEHSAKNLSSQGAYE LAAASGEAAVTIFATGSEVEIALGARDLLEKHGHPTRVVSVPCFELFDKQSDDYRKKTIGNAPIKMAIEAGIRQGWDHLI GSDGIFVGMTGFGASGTIEQLYPHFGITAEAAAKAAEARLHAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 1e-151 | 52 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 2e-142 | 48 |
