Gene Information

Name : mlr1396 (mlr1396)
Accession : NP_102994.1
Strain : Mesorhizobium loti MAFF303099
Genome accession: NC_002678
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1168838 - 1169545 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence :
GTGGCCGCCGGCGCCCCCCTCATCACCTTCGACAAGGTCTGGAAGAGCTATGGCCAGGGCGAGGCCCGCGTGCACGCGCT
GGCCGGCGTCGACCTTGCCATCCGGCGCGGCGAATTCGTCGCCATCATGGGCCCGTCCGGCTCGGGCAAATCGACGGCGA
TGAACATCATCGGCTGCCTCGACACACCGACGGCCGGAACCTACTCGTTCATGGGAATCGACGCCGGCCGGCTCGACCGC
AACCGCCGCGCCATGCTGCGCAACCTCTATGTCGGCTTCGTCTTCCAGGGCTACAATCTGCTGGCGCGCACCACGGCGGC
AGAAAATGTCGAACTGCCGCTGATCTATCGCGGCGTGGCTAGCCGCGAGCGCCGCGGCCTTGCCATGCAGGCGCTCGCCC
AGGTCGGTCTGGTCGGCCGCGAGCATCACACGCCGGCCGAACTCTCCGGCGGCCAGCAGCAGCGCGTGGCCATCGCGCGC
GCCATCGTCACCCGGCCGACGCTGCTCGTCGCCGACGAGCCGACCGGCAATCTCGACACCGCCCGCACGCACGAGATCAT
GGAGTTGCTGACAAAGCTCAACAAGGAGCTCGGCCTGACCGTCACCATGGTCACGCACGAGGCCGACGTCGCCGACTATG
CCGAGCGCACCATCCGCTTCCTCGACGGCCATCTCGCCTCCGACACCGTGAATGTCGAGGTGGCCTGA

Protein sequence :
MAAGAPLITFDKVWKSYGQGEARVHALAGVDLAIRRGEFVAIMGPSGSGKSTAMNIIGCLDTPTAGTYSFMGIDAGRLDR
NRRAMLRNLYVGFVFQGYNLLARTTAAENVELPLIYRGVASRERRGLAMQALAQVGLVGREHHTPAELSGGQQQRVAIAR
AIVTRPTLLVADEPTGNLDTARTHEIMELLTKLNKELGLTVTMVTHEADVADYAERTIRFLDGHLASDTVNVEVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-31 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mlr1396 NP_102994.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-52 52
mlr1396 NP_102994.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-38 48
mlr1396 NP_102994.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-36 42