Gene Information

Name : mlr1334 (mlr1334)
Accession : NP_102946.1
Strain : Mesorhizobium loti MAFF303099
Genome accession: NC_002678
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1117595 - 1118362 bp
Length : 768 bp
Strand : +
Note : -

DNA sequence : 
ATGCAGGCTGCGGCAAGCTCCGGCCGGATCGATCTGAACGCCGAGTTCAAATCGGCGAGGCAAGGCCCGCATATCCTCAT
TGTCGAAGACGATATCGAGATCGCGCGGATGCTGGGCGAGACGCTCACTGAAAACGGCATGATCGTCGAAATCGCCGGCA
ACGGCGCCCGCATGAACGCCGCGCTTCGCAACCAGAAATTCGATCTCATCGTGCTCGATATCATGCTGCCTGGCGAGAAC
GGCCTCAGCATCTGCCGCCGGCTCCGTGCGCACACGAACGTTCCGATCCTGATGCTGACCGCGCTTGGCGAGGAAATCGA
CCGCATCTTCGGACTGGAAATCGGCGCCGACGACTACGTGACCAAACCGTTCAGCGCGCGCGAACTGACGGCAAGGATAA
GGGCGCTGCTGCGCCGCACGGCCTACGCTCCCGACGAACGGGACCGGACAAAGGTGCTTCGCTTCAACGGCTGGCGCCTC
GATCCCGTTCGCCGGCAATTGCATGATCCCAGCAATGCGCGGGTTGCGACCACGACGCATGAATTCGATCTTCTGCTGGC
GTTTTGCCGCAATGCGGGCCGGGTTCTGTCGCGCGAGGAGCTTCTCAGCGTCACCCATGCCGGGCTTGCCGGGCCGATCG
AGCGAAGCGTCGATGTCCATGTCAGCCGGATCCGCCAGAAGATCGAAAAGGATGCGCGCGATCCGGTTCTTCTCAAAACT
GTCCGGCTGGGTGGCTATATCTTCACCGCCACGGTGGAGGAAGCGTGA

Protein sequence : 
MQAAASSGRIDLNAEFKSARQGPHILIVEDDIEIARMLGETLTENGMIVEIAGNGARMNAALRNQKFDLIVLDIMLPGEN
GLSICRRLRAHTNVPILMLTALGEEIDRIFGLEIGADDYVTKPFSARELTARIRALLRRTAYAPDERDRTKVLRFNGWRL
DPVRRQLHDPSNARVATTTHEFDLLLAFCRNAGRVLSREELLSVTHAGLAGPIERSVDVHVSRIRQKIEKDARDPVLLKT
VRLGGYIFTATVEEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 8e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mlr1334 NP_102946.1 two-component response regulator NC_008702.1.4607594. Protein 7e-45 48
mlr1334 NP_102946.1 two-component response regulator BAC0347 Protein 5e-21 42
mlr1334 NP_102946.1 two-component response regulator BAC0111 Protein 7e-21 42
mlr1334 NP_102946.1 two-component response regulator AE016830.1.gene1681. Protein 1e-24 41
mlr1334 NP_102946.1 two-component response regulator HE999704.1.gene2815. Protein 1e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mlr1334 NP_102946.1 two-component response regulator VFG1563 Protein 4e-26 41